PROTEIN: HRGMv2_3893_18_27
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3893_18_27.pdb
Genome ID:
Protein ID:
HRGMv2_3893_18_27
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKLKICKYIN SYAYRSQHDL INTALLKALY ENFKEVKIYT GNSSWEILKK DFNGTNKIKY 60 LFVVPGKSRI IGLLRYICSA LNNILILLAS KRTDILFYNF NNVFSLHGLN LINLLLKRKI 120 IIVCHGELEL LISNEGGFQS KIMRFLCRNF YFKTKLSNDI SYIVLGDCII DNLNQIISKQ 180 KINHFFSLDH PFIPYNIVNS ENQQTSKIKV GTVGELNSYK GAEEYVRLLM TIPIDVLRKI 240 EFYSIGSVTS QYTELTKHNV IIPGNGQRLS RSEFDKYVKE LDYILFFYDN DKYKLIASGA 300 IFDAIKYKKP IIALENTYFS YLTNKFGKIG FLCKNINQMS KVIIQLLEFR NSEFDFSGYY 360 LNLTQDKFSN NLKQIINKCL Q 381
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1J7-F1-model_v4 | 1 | 377 | 1 | 401 | 0.7864 |
0.8373 |
| AF-A0A0H3GSJ8-F1-model_v4 | 2 | 381 | 1 | 352 | 0.7794 |
0.8339 |
| AF-K0EV99-F1-model_v4 | 8 | 381 | 1 | 356 | 0.7782 |
0.8278 |
| AF-Q9I1N0-F1-model_v4 | 4 | 380 | 1 | 367 | 0.7778 |
0.8141 |
| AF-K0EZX0-F1-model_v4 | 1 | 381 | 5 | 366 | 0.7709 |
0.8186 |
| AF-Q5FAD9-F1-model_v4 | 4 | 380 | 1 | 354 | 0.7678 |
0.818 |
| AF-F4IBV4-F1-model_v4 | 1 | 381 | 6 | 399 | 0.7672 |
0.8108 |
| AF-A0A0H3GSH7-F1-model_v4 | 2 | 381 | 3 | 381 | 0.7646 |
0.794 |
| AF-Q59002-F1-model_v4 | 3 | 381 | 1 | 386 | 0.7637 |
0.8003 |
| AF-Q7CQX6-F1-model_v4 | 4 | 381 | 1 | 376 | 0.7634 |
0.7952 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEM02719.1 | GT4 | 5 | 381 | 1 | 385 | 0.8169 |
0.8568 |
| QGT94677.1 | GT4 | 1 | 380 | 3 | 400 | 0.8141 |
0.8567 |
| WGQ07508.1 | GT4 | 1 | 380 | 3 | 405 | 0.8134 |
0.8596 |
| AF-A0A7Z1YET2-F1-model_v4 | GT4 | 1 | 381 | 3 | 387 | 0.812 |
0.8406 |
| AF-A0A4Q0TTC7-F1-model_v4 | GT4 | 3 | 376 | 1 | 396 | 0.8116 |
0.8612 |
| AF-A0A144NNB3-F1-model_v4 | GT4 | 1 | 381 | 3 | 387 | 0.8087 |
0.8377 |
| AF-A0A4D6U7M2-F1-model_v4 | GT4 | 1 | 380 | 10 | 396 | 0.8069 |
0.845 |
| AF-M1VDX8-F1-model_v4 | GT4 | 3 | 381 | 2 | 396 | 0.8067 |
0.852 |
| AF-A0A7M1WGW3-F1-model_v4 | GT4 | 1 | 381 | 1 | 402 | 0.8058 |
0.8473 |
| AF-A0A329TGT1-F1-model_v4 | GT4 | 3 | 381 | 1 | 367 | 0.8057 |
0.8432 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEM02719.1 | GT4 | 5 | 381 | 1 | 385 | 0.8169 |
0.8568 |
| A0A345J3W9 | GT4 | 2 | 381 | 1 | 397 | 0.8168 |
0.8547 |
| QGT94677.1 | GT4 | 1 | 380 | 3 | 400 | 0.8141 |
0.8567 |
| WGQ07508.1 | GT4 | 1 | 380 | 3 | 405 | 0.8134 |
0.8596 |
| E1VVH4 | GT4 | 4 | 381 | 1 | 387 | 0.8117 |
0.8503 |
| A0A4Q0TTC7 | GT4 | 3 | 376 | 1 | 396 | 0.8116 |
0.8612 |
| A0A7K0GRN9 | GT4 | 1 | 376 | 1 | 396 | 0.8109 |
0.857 |
| A0A144NNB3 | GT4 | 1 | 381 | 3 | 387 | 0.8087 |
0.8377 |
| A0A4D6U7M2 | GT4 | 1 | 380 | 10 | 396 | 0.8069 |
0.845 |
| M1VDX8 | GT4 | 3 | 381 | 2 | 396 | 0.8067 |
0.852 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly1.cif.gz_B | 2 | 381 | 1 | 367 | 0.7488 |
0.7873 |
| 3mbo-assembly4.cif.gz_G | 2 | 381 | 1 | 363 | 0.7474 |
0.7898 |
| 3mbo-assembly3.cif.gz_F | 2 | 381 | 1 | 367 | 0.7464 |
0.7845 |
| 3oka-assembly1.cif.gz_A | 2 | 381 | 1 | 378 | 0.7444 |
0.7713 |
| 6n1x-assembly1.cif.gz_A | 1 | 381 | 1 | 377 | 0.7426 |
0.7717 |
| 8ila-assembly1.cif.gz_A | 2 | 381 | 1 | 427 | 0.742 |
0.8085 |
| 3mbo-assembly1.cif.gz_A | 1 | 381 | 1 | 370 | 0.7403 |
0.7771 |
| 3mbo-assembly3.cif.gz_E | 2 | 381 | 1 | 373 | 0.7369 |
0.7715 |
| 3c4q-assembly1.cif.gz_A | 4 | 381 | 1 | 392 | 0.7355 |
0.779 |
| 2jjm-assembly1.cif.gz_B | 2 | 380 | 1 | 359 | 0.7348 |
0.7809 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8KIU8-F1-model_v4 | 3 | 381 | 1 | 397 | 0.7885 |
0.8337 |
| AF-Q59002-F1-model_v4 | 3 | 381 | 1 | 386 | 0.7637 |
0.8003 |
| AF-Q58469-F1-model_v4 | 1 | 381 | 1 | 392 | 0.7634 |
0.7983 |
| AF-Q0P9C7-F1-model_v4 | 2 | 380 | 1 | 365 | 0.7624 |
0.8028 |
| AF-Q0P9C9-F1-model_v4 | 5 | 381 | 1 | 375 | 0.7561 |
0.7867 |
| AF-P39862-F1-model_v4 | 2 | 381 | 1 | 376 | 0.7555 |
0.7874 |
| AF-P9WMY8-F1-model_v4 | 3 | 381 | 1 | 395 | 0.7537 |
0.8092 |
| AF-O05083-F1-model_v4 | 2 | 376 | 1 | 353 | 0.7526 |
0.8052 |
| AF-Q4H4F8-F1-model_v4 | 15 | 381 | 1 | 384 | 0.7432 |
0.802 |
| AF-D7GDZ9-F1-model_v4 | 3 | 381 | 1 | 366 | 0.7422 |
0.7951 |