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Cluster: HRGMv2_3883_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3883_2 HRGMv2_3883_2_25 26933 29386 - 9.B.144.1.4
TC HRGMv2_3883_2 HRGMv2_3883_2_26 29538 30083 + 2.A.51.1.6
TC HRGMv2_3883_2 HRGMv2_3883_2_27 30090 30617 + 2.A.51.1.6
TC HRGMv2_3883_2 HRGMv2_3883_2_28 30669 31673 - 2.A.4.7.7
NULL(UNKNOWN) HRGMv2_3883_2 HRGMv2_3883_2_29 31753 34179 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3883_2 HRGMv2_3883_2_30 35274 36359 - CBM9
NULL(UNKNOWN) HRGMv2_3883_2 HRGMv2_3883_2_31 36394 36852 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3883_2 HRGMv2_3883_2_32 36968 38797 - 3.A.1.135.5
Gene ID: HRGMv2_3883_2_25
Type: TC
Location: 26933 - 29386 (-)
Gene ID: HRGMv2_3883_2_26
Type: TC
Location: 29538 - 30083 (+)
Gene ID: HRGMv2_3883_2_27
Type: TC
Location: 30090 - 30617 (+)
Gene ID: HRGMv2_3883_2_28
Type: TC
Location: 30669 - 31673 (-)
Gene ID: HRGMv2_3883_2_29
Type:
Location: 31753 - 34179 (-)
Gene ID: HRGMv2_3883_2_30
Type: CAZyme
Location: 35274 - 36359 (-)
Gene ID: HRGMv2_3883_2_31
Type:
Location: 36394 - 36852 (-)
Gene ID: HRGMv2_3883_2_32
Type: TC
Location: 36968 - 38797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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