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Cluster: HRGMv2_3882_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3882_36 HRGMv2_3882_36_4 2953 4419 - 2.A.1.4.6
pfam HRGMv2_3882_36 HRGMv2_3882_36_5 4711 5577 + Hydrolase | PGP_phosphatase | Hydrolase_like | Hydrolase_6 | HAD_2
TC HRGMv2_3882_36 HRGMv2_3882_36_6 5776 6576 + 2.A.5.5.5
TC HRGMv2_3882_36 HRGMv2_3882_36_7 6631 7593 + 2.A.19.5.2
STP HRGMv2_3882_36 HRGMv2_3882_36_8 7569 8618 - HhH-GPD
pfam HRGMv2_3882_36 HRGMv2_3882_36_9 8685 9032 + Acetyltransf_CG
CAZyme HRGMv2_3882_36 HRGMv2_3882_36_10 9066 10496 - CE20
NULL(UNKNOWN) HRGMv2_3882_36 HRGMv2_3882_36_11 10763 11401 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3882_36 HRGMv2_3882_36_12 11409 11693 + 0044258
TC HRGMv2_3882_36 HRGMv2_3882_36_13 11758 12684 - 2.A.124.1.2
Gene ID: HRGMv2_3882_36_4
Type: TC
Location: 2953 - 4419 (-)
Gene ID: HRGMv2_3882_36_5
Type: pfam
Location: 4711 - 5577 (+)
Gene ID: HRGMv2_3882_36_6
Type: TC
Location: 5776 - 6576 (+)
Gene ID: HRGMv2_3882_36_7
Type: TC
Location: 6631 - 7593 (+)
Gene ID: HRGMv2_3882_36_8
Type: STP
Location: 7569 - 8618 (-)
Gene ID: HRGMv2_3882_36_9
Type: pfam
Location: 8685 - 9032 (+)
Gene ID: HRGMv2_3882_36_10
Type: CAZyme
Location: 9066 - 10496 (-)
Gene ID: HRGMv2_3882_36_11
Type:
Location: 10763 - 11401 (+)
Gene ID: HRGMv2_3882_36_12
Type: TF
Location: 11409 - 11693 (+)
Gene ID: HRGMv2_3882_36_13
Type: TC
Location: 11758 - 12684 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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