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Cluster: HRGMv2_3882_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3882_16 HRGMv2_3882_16_12 13739 16726 + 1.B.14.6.1
pfam HRGMv2_3882_16 HRGMv2_3882_16_13 16746 18461 + SusD_RagB
pfam HRGMv2_3882_16 HRGMv2_3882_16_14 18511 20019 + Metallophos | MetallophosC | MetallophosN
CAZyme HRGMv2_3882_16 HRGMv2_3882_16_15 20089 22329 + GH31_16
pfam HRGMv2_3882_16 HRGMv2_3882_16_16 22430 24040 + DUF6377
sulfatase HRGMv2_3882_16 HRGMv2_3882_16_17 24101 25363 - S1_48
CAZyme HRGMv2_3882_16 HRGMv2_3882_16_18 25498 26412 + GH97
Gene ID: HRGMv2_3882_16_12
Type: TC
Location: 13739 - 16726 (+)
Gene ID: HRGMv2_3882_16_13
Type: pfam
Location: 16746 - 18461 (+)
Gene ID: HRGMv2_3882_16_14
Type: pfam
Location: 18511 - 20019 (+)
Gene ID: HRGMv2_3882_16_15
Type: CAZyme
Location: 20089 - 22329 (+)
Gene ID: HRGMv2_3882_16_16
Type: pfam
Location: 22430 - 24040 (+)
Gene ID: HRGMv2_3882_16_17
Type: sulfatase
Location: 24101 - 25363 (-)
Gene ID: HRGMv2_3882_16_18
Type: CAZyme
Location: 25498 - 26412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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