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Cluster: HRGMv2_3879_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3879_3 HRGMv2_3879_3_35 42495 45479 + 1.B.14.6.1
pfam HRGMv2_3879_3 HRGMv2_3879_3_36 45493 47106 + SusD_RagB | SusD-like_2 | SusD-like_3
CAZyme HRGMv2_3879_3 HRGMv2_3879_3_37 47136 49169 + GH146
peptidase HRGMv2_3879_3 HRGMv2_3879_3_38 49260 52490 - S41.UPB
TC HRGMv2_3879_3 HRGMv2_3879_3_39 52606 53766 - 2.A.1.2.14
NULL(UNKNOWN) HRGMv2_3879_3 HRGMv2_3879_3_40 54004 55455 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3879_3 HRGMv2_3879_3_41 55510 56451 - SusE
TC HRGMv2_3879_3 HRGMv2_3879_3_42 56480 58057 - 8.A.46.1.1
TC HRGMv2_3879_3 HRGMv2_3879_3_43 58079 61225 - 1.B.14.6.1
Gene ID: HRGMv2_3879_3_35
Type: TC
Location: 42495 - 45479 (+)
Gene ID: HRGMv2_3879_3_36
Type: pfam
Location: 45493 - 47106 (+)
Gene ID: HRGMv2_3879_3_37
Type: CAZyme
Location: 47136 - 49169 (+)
Gene ID: HRGMv2_3879_3_38
Type: peptidase
Location: 49260 - 52490 (-)
Gene ID: HRGMv2_3879_3_39
Type: TC
Location: 52606 - 53766 (-)
Gene ID: HRGMv2_3879_3_40
Type:
Location: 54004 - 55455 (-)
Gene ID: HRGMv2_3879_3_41
Type: pfam
Location: 55510 - 56451 (-)
Gene ID: HRGMv2_3879_3_42
Type: TC
Location: 56480 - 58057 (-)
Gene ID: HRGMv2_3879_3_43
Type: TC
Location: 58079 - 61225 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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