Cluster: HRGMv2_3879_CGC12
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3879
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3879_5 | HRGMv2_3879_5_57 | 55525 | 57945 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_3879_5 | HRGMv2_3879_5_58 | 58468 | 58557 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3879_5 | HRGMv2_3879_5_59 | 58581 | 59945 | + | SH3_3 |
| TC | HRGMv2_3879_5 | HRGMv2_3879_5_60 | 60318 | 61529 | + | 1.B.3.1.7 |
| peptidase | HRGMv2_3879_5 | HRGMv2_3879_5_61 | 61575 | 62804 | + | M75.UPW |
| pfam | HRGMv2_3879_5 | HRGMv2_3879_5_62 | 62807 | 64471 | + | DHOR |
| TC | HRGMv2_3879_5 | HRGMv2_3879_5_63 | 64484 | 66475 | + | 9.B.14.3.1 |
| CAZyme | HRGMv2_3879_5 | HRGMv2_3879_5_64 | 66565 | 69147 | - | GH43_5 |
| pfam | HRGMv2_3879_5 | HRGMv2_3879_5_65 | 69172 | 69672 | - | DUF3237 |
| peptidase | HRGMv2_3879_5 | HRGMv2_3879_5_66 | 69679 | 71130 | - | S09.UPW |
| CAZyme | HRGMv2_3879_5 | HRGMv2_3879_5_67 | 71142 | 73628 | - | GH51_2 |
| TF | HRGMv2_3879_5 | HRGMv2_3879_5_68 | 73790 | 75313 | + | HTH_AraC |
| pfam | HRGMv2_3879_5 | HRGMv2_3879_5_69 | 75390 | 76310 | - | KduI |
| TC | HRGMv2_3879_5 | HRGMv2_3879_5_70 | 76331 | 77734 | - | 4.A.5.1.4 |
Gene ID: HRGMv2_3879_5_57
Type: CAZyme
Location: 55525 - 57945 (-)
Type: CAZyme
Location: 55525 - 57945 (-)
Gene ID: HRGMv2_3879_5_58
Type:
Location: 58468 - 58557 (-)
Type:
Location: 58468 - 58557 (-)
Gene ID: HRGMv2_3879_5_59
Type: pfam
Location: 58581 - 59945 (+)
Type: pfam
Location: 58581 - 59945 (+)
Gene ID: HRGMv2_3879_5_60
Type: TC
Location: 60318 - 61529 (+)
Type: TC
Location: 60318 - 61529 (+)
Gene ID: HRGMv2_3879_5_61
Type: peptidase
Location: 61575 - 62804 (+)
Type: peptidase
Location: 61575 - 62804 (+)
Gene ID: HRGMv2_3879_5_62
Type: pfam
Location: 62807 - 64471 (+)
Type: pfam
Location: 62807 - 64471 (+)
Gene ID: HRGMv2_3879_5_63
Type: TC
Location: 64484 - 66475 (+)
Type: TC
Location: 64484 - 66475 (+)
Gene ID: HRGMv2_3879_5_64
Type: CAZyme
Location: 66565 - 69147 (-)
Type: CAZyme
Location: 66565 - 69147 (-)
Gene ID: HRGMv2_3879_5_65
Type: pfam
Location: 69172 - 69672 (-)
Type: pfam
Location: 69172 - 69672 (-)
Gene ID: HRGMv2_3879_5_66
Type: peptidase
Location: 69679 - 71130 (-)
Type: peptidase
Location: 69679 - 71130 (-)
Gene ID: HRGMv2_3879_5_67
Type: CAZyme
Location: 71142 - 73628 (-)
Type: CAZyme
Location: 71142 - 73628 (-)
Gene ID: HRGMv2_3879_5_68
Type: TF
Location: 73790 - 75313 (+)
Type: TF
Location: 73790 - 75313 (+)
Gene ID: HRGMv2_3879_5_69
Type: pfam
Location: 75390 - 76310 (-)
Type: pfam
Location: 75390 - 76310 (-)
Gene ID: HRGMv2_3879_5_70
Type: TC
Location: 76331 - 77734 (-)
Type: TC
Location: 76331 - 77734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Muribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.