Cluster: HRGMv2_3877_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3877
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3877_2 | HRGMv2_3877_2_58 | 91799 | 93706 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | HRGMv2_3877_2 | HRGMv2_3877_2_59 | 93725 | 94612 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | HRGMv2_3877_2 | HRGMv2_3877_2_60 | 95021 | 96277 | - | S1_62 |
| CAZyme | HRGMv2_3877_2 | HRGMv2_3877_2_61 | 96821 | 98518 | + | GH66 |
Gene ID: HRGMv2_3877_2_58
Type: TC
Location: 91799 - 93706 (-)
Type: TC
Location: 91799 - 93706 (-)
Gene ID: HRGMv2_3877_2_59
Type:
Location: 93725 - 94612 (-)
Type:
Location: 93725 - 94612 (-)
Gene ID: HRGMv2_3877_2_60
Type: sulfatase
Location: 95021 - 96277 (-)
Type: sulfatase
Location: 95021 - 96277 (-)
Gene ID: HRGMv2_3877_2_61
Type: CAZyme
Location: 96821 - 98518 (+)
Type: CAZyme
Location: 96821 - 98518 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes cottocaccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.