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Cluster: HRGMv2_3877_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3877_49 HRGMv2_3877_49_3 1998 3140 - GT9
pfam HRGMv2_3877_49 HRGMv2_3877_49_4 3154 3759 - DUF4254
CAZyme HRGMv2_3877_49 HRGMv2_3877_49_5 3835 4839 + GH73
NULL(UNKNOWN) HRGMv2_3877_49 HRGMv2_3877_49_6 4919 5605 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3877_49 HRGMv2_3877_49_7 5647 7809 + 8.A.51.1.1
pfam HRGMv2_3877_49 HRGMv2_3877_49_8 7806 8279 + DNA_binding_1 | Methyltransf_1N
TC HRGMv2_3877_49 HRGMv2_3877_49_9 8402 9829 - 3.D.1.2.1
TC HRGMv2_3877_49 HRGMv2_3877_49_10 9837 11321 - 3.D.1.5.1
TC HRGMv2_3877_49 HRGMv2_3877_49_11 11334 13226 - 3.D.9.1.1
TC HRGMv2_3877_49 HRGMv2_3877_49_12 13243 13551 - 3.D.1.2.1
TC HRGMv2_3877_49 HRGMv2_3877_49_13 13565 14074 - 3.D.9.1.1
STP HRGMv2_3877_49 HRGMv2_3877_49_14 14078 14512 - Fer4 | Fer4
TC HRGMv2_3877_49 HRGMv2_3877_49_15 14515 15591 - 3.D.1.5.1
TC HRGMv2_3877_49 HRGMv2_3877_49_16 15612 15839 - 3.D.1.6.4
Gene ID: HRGMv2_3877_49_3
Type: CAZyme
Location: 1998 - 3140 (-)
Gene ID: HRGMv2_3877_49_4
Type: pfam
Location: 3154 - 3759 (-)
Gene ID: HRGMv2_3877_49_5
Type: CAZyme
Location: 3835 - 4839 (+)
Gene ID: HRGMv2_3877_49_6
Type:
Location: 4919 - 5605 (+)
Gene ID: HRGMv2_3877_49_7
Type: TC
Location: 5647 - 7809 (+)
Gene ID: HRGMv2_3877_49_8
Type: pfam
Location: 7806 - 8279 (+)
Gene ID: HRGMv2_3877_49_9
Type: TC
Location: 8402 - 9829 (-)
Gene ID: HRGMv2_3877_49_10
Type: TC
Location: 9837 - 11321 (-)
Gene ID: HRGMv2_3877_49_11
Type: TC
Location: 11334 - 13226 (-)
Gene ID: HRGMv2_3877_49_12
Type: TC
Location: 13243 - 13551 (-)
Gene ID: HRGMv2_3877_49_13
Type: TC
Location: 13565 - 14074 (-)
Gene ID: HRGMv2_3877_49_14
Type: STP
Location: 14078 - 14512 (-)
Gene ID: HRGMv2_3877_49_15
Type: TC
Location: 14515 - 15591 (-)
Gene ID: HRGMv2_3877_49_16
Type: TC
Location: 15612 - 15839 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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