dbCAN Logo

Cluster: HRGMv2_3877_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3877_44 HRGMv2_3877_44_7 3862 5898 - GH13_8
TC HRGMv2_3877_44 HRGMv2_3877_44_8 5988 7574 + 2.A.17.1.6
STP HRGMv2_3877_44 HRGMv2_3877_44_9 7733 8359 + TetR_N
TC HRGMv2_3877_44 HRGMv2_3877_44_10 8420 9712 + 1.B.17.2.10
TC HRGMv2_3877_44 HRGMv2_3877_44_11 9738 10751 + 2.A.6.2.32
TC HRGMv2_3877_44 HRGMv2_3877_44_12 10765 13905 + 2.A.6.3.6
NULL(UNKNOWN) HRGMv2_3877_44 HRGMv2_3877_44_13 13969 14262 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3877_44 HRGMv2_3877_44_14 14578 16566 - GH97
Gene ID: HRGMv2_3877_44_7
Type: CAZyme
Location: 3862 - 5898 (-)
Gene ID: HRGMv2_3877_44_8
Type: TC
Location: 5988 - 7574 (+)
Gene ID: HRGMv2_3877_44_9
Type: STP
Location: 7733 - 8359 (+)
Gene ID: HRGMv2_3877_44_10
Type: TC
Location: 8420 - 9712 (+)
Gene ID: HRGMv2_3877_44_11
Type: TC
Location: 9738 - 10751 (+)
Gene ID: HRGMv2_3877_44_12
Type: TC
Location: 10765 - 13905 (+)
Gene ID: HRGMv2_3877_44_13
Type:
Location: 13969 - 14262 (+)
Gene ID: HRGMv2_3877_44_14
Type: CAZyme
Location: 14578 - 16566 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List