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Cluster: HRGMv2_3877_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3877_31 HRGMv2_3877_31_13 12296 12871 - 2.A.51.1.6
TC HRGMv2_3877_31 HRGMv2_3877_31_14 12884 13447 - 2.A.51.1.6
TC HRGMv2_3877_31 HRGMv2_3877_31_15 13460 14224 - 3.D.1.4.3
CAZyme HRGMv2_3877_31 HRGMv2_3877_31_16 14421 15521 - CE8
TC HRGMv2_3877_31 HRGMv2_3877_31_17 15709 17238 - 3.D.1.9.3
TC HRGMv2_3877_31 HRGMv2_3877_31_18 17235 18635 - 3.D.1.9.1
NULL(UNKNOWN) HRGMv2_3877_31 HRGMv2_3877_31_19 18640 19269 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3877_31 HRGMv2_3877_31_20 19266 20180 - 3.D.1.9.3
TC HRGMv2_3877_31 HRGMv2_3877_31_21 20183 22171 - 3.D.1.9.1
Gene ID: HRGMv2_3877_31_13
Type: TC
Location: 12296 - 12871 (-)
Gene ID: HRGMv2_3877_31_14
Type: TC
Location: 12884 - 13447 (-)
Gene ID: HRGMv2_3877_31_15
Type: TC
Location: 13460 - 14224 (-)
Gene ID: HRGMv2_3877_31_16
Type: CAZyme
Location: 14421 - 15521 (-)
Gene ID: HRGMv2_3877_31_17
Type: TC
Location: 15709 - 17238 (-)
Gene ID: HRGMv2_3877_31_18
Type: TC
Location: 17235 - 18635 (-)
Gene ID: HRGMv2_3877_31_19
Type:
Location: 18640 - 19269 (-)
Gene ID: HRGMv2_3877_31_20
Type: TC
Location: 19266 - 20180 (-)
Gene ID: HRGMv2_3877_31_21
Type: TC
Location: 20183 - 22171 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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