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Cluster: HRGMv2_3877_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3877_27 HRGMv2_3877_27_9 9993 13208 + 1.B.14.6.1
pfam HRGMv2_3877_27 HRGMv2_3877_27_10 13227 15053 + SusD_RagB | SusD-like_2 | SusD-like_3
CAZyme HRGMv2_3877_27 HRGMv2_3877_27_11 15073 16992 + GH16_3
sulfatase HRGMv2_3877_27 HRGMv2_3877_27_12 17229 18815 + S1_11
CAZyme HRGMv2_3877_27 HRGMv2_3877_27_13 18812 21133 + GH20
CAZyme HRGMv2_3877_27 HRGMv2_3877_27_14 21155 24211 + GH2
CAZyme HRGMv2_3877_27 HRGMv2_3877_27_15 24208 26919 + GH16_3 | GH29
Gene ID: HRGMv2_3877_27_9
Type: TC
Location: 9993 - 13208 (+)
Gene ID: HRGMv2_3877_27_10
Type: pfam
Location: 13227 - 15053 (+)
Gene ID: HRGMv2_3877_27_11
Type: CAZyme
Location: 15073 - 16992 (+)
Gene ID: HRGMv2_3877_27_12
Type: sulfatase
Location: 17229 - 18815 (+)
Gene ID: HRGMv2_3877_27_13
Type: CAZyme
Location: 18812 - 21133 (+)
Gene ID: HRGMv2_3877_27_14
Type: CAZyme
Location: 21155 - 24211 (+)
Gene ID: HRGMv2_3877_27_15
Type: CAZyme
Location: 24208 - 26919 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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