Cluster: HRGMv2_3875_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3875
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3875_1 | HRGMv2_3875_1_49 | 52963 | 54054 | - | GT56 |
| STP | HRGMv2_3875_1 | HRGMv2_3875_1_50 | 54057 | 55193 | - | Aminotran_1_2 |
| pfam | HRGMv2_3875_1 | HRGMv2_3875_1_51 | 55274 | 56323 | - | DDE_Tnp_1 |
| CAZyme | HRGMv2_3875_1 | HRGMv2_3875_1_52 | 56523 | 57344 | + | GT2 |
| STP | HRGMv2_3875_1 | HRGMv2_3875_1_53 | 57517 | 61110 | - | Fer4 |
| TC | HRGMv2_3875_1 | HRGMv2_3875_1_54 | 61348 | 62682 | - | 1.I.1.1.3 |
Gene ID: HRGMv2_3875_1_49
Type: CAZyme
Location: 52963 - 54054 (-)
Type: CAZyme
Location: 52963 - 54054 (-)
Gene ID: HRGMv2_3875_1_50
Type: STP
Location: 54057 - 55193 (-)
Type: STP
Location: 54057 - 55193 (-)
Gene ID: HRGMv2_3875_1_51
Type: pfam
Location: 55274 - 56323 (-)
Type: pfam
Location: 55274 - 56323 (-)
Gene ID: HRGMv2_3875_1_52
Type: CAZyme
Location: 56523 - 57344 (+)
Type: CAZyme
Location: 56523 - 57344 (+)
Gene ID: HRGMv2_3875_1_53
Type: STP
Location: 57517 - 61110 (-)
Type: STP
Location: 57517 - 61110 (-)
Gene ID: HRGMv2_3875_1_54
Type: TC
Location: 61348 - 62682 (-)
Type: TC
Location: 61348 - 62682 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.