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Cluster: HRGMv2_3875_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3875_7 HRGMv2_3875_7_41 49945 50676 - GH25
NULL(UNKNOWN) HRGMv2_3875_7 HRGMv2_3875_7_42 50673 51092 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3875_7 HRGMv2_3875_7_43 51149 51829 - DUF2461
CAZyme HRGMv2_3875_7 HRGMv2_3875_7_44 51858 53171 - GT30
pfam HRGMv2_3875_7 HRGMv2_3875_7_45 53217 54737 - tRNA-synt_1c | Anticodon_2
CAZyme HRGMv2_3875_7 HRGMv2_3875_7_46 55029 58409 + GH13_42
pfam HRGMv2_3875_7 HRGMv2_3875_7_47 58955 59749 - SurE
CAZyme HRGMv2_3875_7 HRGMv2_3875_7_48 59746 60777 - GT27
pfam HRGMv2_3875_7 HRGMv2_3875_7_49 60774 62075 - UPF0004 | Radical_SAM
TC HRGMv2_3875_7 HRGMv2_3875_7_50 62314 63192 + 3.A.1.140.1
Gene ID: HRGMv2_3875_7_41
Type: CAZyme
Location: 49945 - 50676 (-)
Gene ID: HRGMv2_3875_7_42
Type:
Location: 50673 - 51092 (-)
Gene ID: HRGMv2_3875_7_43
Type: pfam
Location: 51149 - 51829 (-)
Gene ID: HRGMv2_3875_7_44
Type: CAZyme
Location: 51858 - 53171 (-)
Gene ID: HRGMv2_3875_7_45
Type: pfam
Location: 53217 - 54737 (-)
Gene ID: HRGMv2_3875_7_46
Type: CAZyme
Location: 55029 - 58409 (+)
Gene ID: HRGMv2_3875_7_47
Type: pfam
Location: 58955 - 59749 (-)
Gene ID: HRGMv2_3875_7_48
Type: CAZyme
Location: 59746 - 60777 (-)
Gene ID: HRGMv2_3875_7_49
Type: pfam
Location: 60774 - 62075 (-)
Gene ID: HRGMv2_3875_7_50
Type: TC
Location: 62314 - 63192 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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