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Cluster: HRGMv2_3874_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3874_3 HRGMv2_3874_3_63 90695 91276 - 2.A.51.1.6
TC HRGMv2_3874_3 HRGMv2_3874_3_64 91290 91856 - 2.A.51.1.6
TC HRGMv2_3874_3 HRGMv2_3874_3_65 91860 92624 - 3.D.1.4.3
CAZyme HRGMv2_3874_3 HRGMv2_3874_3_66 92819 93919 - CE8
TC HRGMv2_3874_3 HRGMv2_3874_3_67 94160 95689 - 3.D.1.9.3
TC HRGMv2_3874_3 HRGMv2_3874_3_68 95686 97086 - 3.D.1.9.1
NULL(UNKNOWN) HRGMv2_3874_3 HRGMv2_3874_3_69 97091 97720 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3874_3 HRGMv2_3874_3_70 97717 98631 - 3.D.1.9.3
TC HRGMv2_3874_3 HRGMv2_3874_3_71 98636 100624 - 3.D.1.9.1
Gene ID: HRGMv2_3874_3_63
Type: TC
Location: 90695 - 91276 (-)
Gene ID: HRGMv2_3874_3_64
Type: TC
Location: 91290 - 91856 (-)
Gene ID: HRGMv2_3874_3_65
Type: TC
Location: 91860 - 92624 (-)
Gene ID: HRGMv2_3874_3_66
Type: CAZyme
Location: 92819 - 93919 (-)
Gene ID: HRGMv2_3874_3_67
Type: TC
Location: 94160 - 95689 (-)
Gene ID: HRGMv2_3874_3_68
Type: TC
Location: 95686 - 97086 (-)
Gene ID: HRGMv2_3874_3_69
Type:
Location: 97091 - 97720 (-)
Gene ID: HRGMv2_3874_3_70
Type: TC
Location: 97717 - 98631 (-)
Gene ID: HRGMv2_3874_3_71
Type: TC
Location: 98636 - 100624 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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