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Cluster: HRGMv2_3874_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3874_3 HRGMv2_3874_3_48 71026 72696 + 4.C.1.1.14
pfam HRGMv2_3874_3 HRGMv2_3874_3_49 73084 76335 - TMEM260-like
TC HRGMv2_3874_3 HRGMv2_3874_3_50 76386 78320 - 1.I.1.1.3
pfam HRGMv2_3874_3 HRGMv2_3874_3_51 78411 79886 + tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
NULL(UNKNOWN) HRGMv2_3874_3 HRGMv2_3874_3_52 79955 80482 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3874_3 HRGMv2_3874_3_53 80653 82047 + 2.A.66.1.32
pfam HRGMv2_3874_3 HRGMv2_3874_3_54 82056 82691 + Cytidylate_kin2
pfam HRGMv2_3874_3 HRGMv2_3874_3_55 82704 83816 + RF-1 | PCRF
CAZyme HRGMv2_3874_3 HRGMv2_3874_3_56 83809 85128 + GH171
Gene ID: HRGMv2_3874_3_48
Type: TC
Location: 71026 - 72696 (+)
Gene ID: HRGMv2_3874_3_49
Type: pfam
Location: 73084 - 76335 (-)
Gene ID: HRGMv2_3874_3_50
Type: TC
Location: 76386 - 78320 (-)
Gene ID: HRGMv2_3874_3_51
Type: pfam
Location: 78411 - 79886 (+)
Gene ID: HRGMv2_3874_3_52
Type:
Location: 79955 - 80482 (+)
Gene ID: HRGMv2_3874_3_53
Type: TC
Location: 80653 - 82047 (+)
Gene ID: HRGMv2_3874_3_54
Type: pfam
Location: 82056 - 82691 (+)
Gene ID: HRGMv2_3874_3_55
Type: pfam
Location: 82704 - 83816 (+)
Gene ID: HRGMv2_3874_3_56
Type: CAZyme
Location: 83809 - 85128 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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