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Cluster: HRGMv2_3874_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3874_34 HRGMv2_3874_34_1 514 2709 - GH97
CAZyme HRGMv2_3874_34 HRGMv2_3874_34_2 2722 4599 - GH13_46
CAZyme HRGMv2_3874_34 HRGMv2_3874_34_3 4798 6135 - GH13
CAZyme HRGMv2_3874_34 HRGMv2_3874_34_4 6146 8464 - GH13_36
pfam HRGMv2_3874_34 HRGMv2_3874_34_5 8572 10386 - SusE
TC HRGMv2_3874_34 HRGMv2_3874_34_6 10410 12068 - 8.A.46.1.1
TC HRGMv2_3874_34 HRGMv2_3874_34_7 12082 15105 - 1.B.14.6.1
TC HRGMv2_3874_34 HRGMv2_3874_34_8 15167 16036 - 2.A.2.6.3
TC HRGMv2_3874_34 HRGMv2_3874_34_9 16038 16475 - 2.A.2.6.2
Gene ID: HRGMv2_3874_34_1
Type: CAZyme
Location: 514 - 2709 (-)
Gene ID: HRGMv2_3874_34_2
Type: CAZyme
Location: 2722 - 4599 (-)
Gene ID: HRGMv2_3874_34_3
Type: CAZyme
Location: 4798 - 6135 (-)
Gene ID: HRGMv2_3874_34_4
Type: CAZyme
Location: 6146 - 8464 (-)
Gene ID: HRGMv2_3874_34_5
Type: pfam
Location: 8572 - 10386 (-)
Gene ID: HRGMv2_3874_34_6
Type: TC
Location: 10410 - 12068 (-)
Gene ID: HRGMv2_3874_34_7
Type: TC
Location: 12082 - 15105 (-)
Gene ID: HRGMv2_3874_34_8
Type: TC
Location: 15167 - 16036 (-)
Gene ID: HRGMv2_3874_34_9
Type: TC
Location: 16038 - 16475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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