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Cluster: HRGMv2_3874_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3874_28 HRGMv2_3874_28_12 14360 14710 + 3.D.1.8.1
TC HRGMv2_3874_28 HRGMv2_3874_28_13 14731 15363 + 3.D.1.3.1
TC HRGMv2_3874_28 HRGMv2_3874_28_14 15353 16972 + 3.D.1.5.1
TC HRGMv2_3874_28 HRGMv2_3874_28_15 16990 18066 + 3.D.1.5.1
STP HRGMv2_3874_28 HRGMv2_3874_28_16 18069 18503 + Fer4 | Fer4
TC HRGMv2_3874_28 HRGMv2_3874_28_17 18507 19016 + 3.D.9.1.1
TC HRGMv2_3874_28 HRGMv2_3874_28_18 19030 19338 + 3.D.1.2.1
TC HRGMv2_3874_28 HRGMv2_3874_28_19 19358 21250 + 3.D.1.2.1
TC HRGMv2_3874_28 HRGMv2_3874_28_20 21263 22747 + 3.D.1.5.1
TC HRGMv2_3874_28 HRGMv2_3874_28_21 22755 24182 + 3.D.1.2.1
CAZyme HRGMv2_3874_28 HRGMv2_3874_28_22 24333 25982 + GT22
pfam HRGMv2_3874_28 HRGMv2_3874_28_23 25844 26500 - DNA_binding_1 | Methyltransf_1N
TC HRGMv2_3874_28 HRGMv2_3874_28_24 26506 28668 - 8.A.51.1.1
Gene ID: HRGMv2_3874_28_12
Type: TC
Location: 14360 - 14710 (+)
Gene ID: HRGMv2_3874_28_13
Type: TC
Location: 14731 - 15363 (+)
Gene ID: HRGMv2_3874_28_14
Type: TC
Location: 15353 - 16972 (+)
Gene ID: HRGMv2_3874_28_15
Type: TC
Location: 16990 - 18066 (+)
Gene ID: HRGMv2_3874_28_16
Type: STP
Location: 18069 - 18503 (+)
Gene ID: HRGMv2_3874_28_17
Type: TC
Location: 18507 - 19016 (+)
Gene ID: HRGMv2_3874_28_18
Type: TC
Location: 19030 - 19338 (+)
Gene ID: HRGMv2_3874_28_19
Type: TC
Location: 19358 - 21250 (+)
Gene ID: HRGMv2_3874_28_20
Type: TC
Location: 21263 - 22747 (+)
Gene ID: HRGMv2_3874_28_21
Type: TC
Location: 22755 - 24182 (+)
Gene ID: HRGMv2_3874_28_22
Type: CAZyme
Location: 24333 - 25982 (+)
Gene ID: HRGMv2_3874_28_23
Type: pfam
Location: 25844 - 26500 (-)
Gene ID: HRGMv2_3874_28_24
Type: TC
Location: 26506 - 28668 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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