dbCAN Logo

Cluster: HRGMv2_3874_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3874_25 HRGMv2_3874_25_2 1710 4922 + 1.B.14.6.1
pfam HRGMv2_3874_25 HRGMv2_3874_25_3 4947 6728 + SusD_RagB | SusD-like_3
TC HRGMv2_3874_25 HRGMv2_3874_25_4 6782 9484 + 1.B.14.6.1
pfam HRGMv2_3874_25 HRGMv2_3874_25_5 9503 11173 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_3874_25 HRGMv2_3874_25_6 11208 12638 + GH128
CAZyme HRGMv2_3874_25 HRGMv2_3874_25_7 12657 14585 + GH16_3 | GH43_24
sulfatase HRGMv2_3874_25 HRGMv2_3874_25_8 14592 16058 + S1_27
CAZyme HRGMv2_3874_25 HRGMv2_3874_25_9 16055 18487 + GH2
CAZyme HRGMv2_3874_25 HRGMv2_3874_25_10 18491 19930 + GH128
Gene ID: HRGMv2_3874_25_2
Type: TC
Location: 1710 - 4922 (+)
Gene ID: HRGMv2_3874_25_3
Type: pfam
Location: 4947 - 6728 (+)
Gene ID: HRGMv2_3874_25_4
Type: TC
Location: 6782 - 9484 (+)
Gene ID: HRGMv2_3874_25_5
Type: pfam
Location: 9503 - 11173 (+)
Gene ID: HRGMv2_3874_25_6
Type: CAZyme
Location: 11208 - 12638 (+)
Gene ID: HRGMv2_3874_25_7
Type: CAZyme
Location: 12657 - 14585 (+)
Gene ID: HRGMv2_3874_25_8
Type: sulfatase
Location: 14592 - 16058 (+)
Gene ID: HRGMv2_3874_25_9
Type: CAZyme
Location: 16055 - 18487 (+)
Gene ID: HRGMv2_3874_25_10
Type: CAZyme
Location: 18491 - 19930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List