dbCAN Logo

Cluster: HRGMv2_3874_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3874_21 HRGMv2_3874_21_8 8817 10982 + PL8
pfam HRGMv2_3874_21 HRGMv2_3874_21_9 11193 13475 - DUF4988
CAZyme HRGMv2_3874_21 HRGMv2_3874_21_10 13496 16102 - PL29
sulfatase HRGMv2_3874_21 HRGMv2_3874_21_11 16114 17631 - S1_27
CAZyme HRGMv2_3874_21 HRGMv2_3874_21_12 17652 20684 - PL8_2
CAZyme HRGMv2_3874_21 HRGMv2_3874_21_13 20701 21915 - GH88
CAZyme HRGMv2_3874_21 HRGMv2_3874_21_14 22152 25103 + PL8_2
TC HRGMv2_3874_21 HRGMv2_3874_21_15 25162 28296 + 1.B.14.6.1
TC HRGMv2_3874_21 HRGMv2_3874_21_16 28320 30218 + 8.A.46.1.3
Gene ID: HRGMv2_3874_21_8
Type: CAZyme
Location: 8817 - 10982 (+)
Gene ID: HRGMv2_3874_21_9
Type: pfam
Location: 11193 - 13475 (-)
Gene ID: HRGMv2_3874_21_10
Type: CAZyme
Location: 13496 - 16102 (-)
Gene ID: HRGMv2_3874_21_11
Type: sulfatase
Location: 16114 - 17631 (-)
Gene ID: HRGMv2_3874_21_12
Type: CAZyme
Location: 17652 - 20684 (-)
Gene ID: HRGMv2_3874_21_13
Type: CAZyme
Location: 20701 - 21915 (-)
Gene ID: HRGMv2_3874_21_14
Type: CAZyme
Location: 22152 - 25103 (+)
Gene ID: HRGMv2_3874_21_15
Type: TC
Location: 25162 - 28296 (+)
Gene ID: HRGMv2_3874_21_16
Type: TC
Location: 28320 - 30218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List