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Cluster: HRGMv2_3874_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3874_17 HRGMv2_3874_17_23 25635 26207 + CE4
pfam HRGMv2_3874_17 HRGMv2_3874_17_24 26325 26891 + EFP | EFP_N | Elong-fact-P_C
CAZyme HRGMv2_3874_17 HRGMv2_3874_17_25 27047 28816 - GH78
CAZyme HRGMv2_3874_17 HRGMv2_3874_17_26 28813 32079 - GH106
CAZyme HRGMv2_3874_17 HRGMv2_3874_17_27 32157 34784 - CBM67 | GH78
CAZyme HRGMv2_3874_17 HRGMv2_3874_17_28 34810 37572 - CBM67 | GH78
pfam HRGMv2_3874_17 HRGMv2_3874_17_29 37654 38457 - Aldolase_II
TC HRGMv2_3874_17 HRGMv2_3874_17_30 38468 39496 - 2.A.7.6.1
Gene ID: HRGMv2_3874_17_23
Type: CAZyme
Location: 25635 - 26207 (+)
Gene ID: HRGMv2_3874_17_24
Type: pfam
Location: 26325 - 26891 (+)
Gene ID: HRGMv2_3874_17_25
Type: CAZyme
Location: 27047 - 28816 (-)
Gene ID: HRGMv2_3874_17_26
Type: CAZyme
Location: 28813 - 32079 (-)
Gene ID: HRGMv2_3874_17_27
Type: CAZyme
Location: 32157 - 34784 (-)
Gene ID: HRGMv2_3874_17_28
Type: CAZyme
Location: 34810 - 37572 (-)
Gene ID: HRGMv2_3874_17_29
Type: pfam
Location: 37654 - 38457 (-)
Gene ID: HRGMv2_3874_17_30
Type: TC
Location: 38468 - 39496 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3874_17_26 vegetarian > vegan 1.31653 0.02653
HRGMv2_3874_17_27 vegetarian > vegan 1.28733 0.02653

🧭 Explore Read Mapping of CGC

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