dbCAN Logo

Cluster: HRGMv2_3874_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3874_10 HRGMv2_3874_10_67 87064 88047 + GT2
TC HRGMv2_3874_10 HRGMv2_3874_10_68 88238 91540 + 3.A.5.1.1
pfam HRGMv2_3874_10 HRGMv2_3874_10_69 91737 92177 + dCMP_cyt_deam_1 | MafB19-deam
pfam HRGMv2_3874_10 HRGMv2_3874_10_70 92435 93169 + adh_short | adh_short_C2
TC HRGMv2_3874_10 HRGMv2_3874_10_71 93170 94684 + 9.B.33.1.1
pfam HRGMv2_3874_10 HRGMv2_3874_10_72 94810 97449 + DUF4953 | DUF5117 | DUF5118
TC HRGMv2_3874_10 HRGMv2_3874_10_73 97601 100993 + 1.B.14.6.1
Gene ID: HRGMv2_3874_10_67
Type: CAZyme
Location: 87064 - 88047 (+)
Gene ID: HRGMv2_3874_10_68
Type: TC
Location: 88238 - 91540 (+)
Gene ID: HRGMv2_3874_10_69
Type: pfam
Location: 91737 - 92177 (+)
Gene ID: HRGMv2_3874_10_70
Type: pfam
Location: 92435 - 93169 (+)
Gene ID: HRGMv2_3874_10_71
Type: TC
Location: 93170 - 94684 (+)
Gene ID: HRGMv2_3874_10_72
Type: pfam
Location: 94810 - 97449 (+)
Gene ID: HRGMv2_3874_10_73
Type: TC
Location: 97601 - 100993 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List