Cluster: HRGMv2_3869_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3869
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3869_6 | HRGMv2_3869_6_28 | 39232 | 40311 | + | 1.B.42.1.13 |
| pfam | HRGMv2_3869_6 | HRGMv2_3869_6_29 | 40334 | 41650 | + | PseudoU_synth_2 | S4 |
| TC | HRGMv2_3869_6 | HRGMv2_3869_6_30 | 42051 | 44468 | + | 1.B.18.1.2 |
| pfam | HRGMv2_3869_6 | HRGMv2_3869_6_31 | 44474 | 45601 | + | Wzz | GNVR |
| pfam | HRGMv2_3869_6 | HRGMv2_3869_6_32 | 45778 | 46776 | + | Wzz | GNVR |
| TC | HRGMv2_3869_6 | HRGMv2_3869_6_33 | 47080 | 48444 | + | 2.A.66.10.1 |
| CAZyme | HRGMv2_3869_6 | HRGMv2_3869_6_34 | 48503 | 49297 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3869_6 | HRGMv2_3869_6_35 | 49328 | 50593 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3869_6 | HRGMv2_3869_6_36 | 50667 | 51728 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_3869_6 | HRGMv2_3869_6_37 | 51740 | 52738 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3869_6 | HRGMv2_3869_6_38 | 52785 | 54032 | + | Amino_oxidase | NAD_binding_8 |
| CAZyme | HRGMv2_3869_6 | HRGMv2_3869_6_39 | 54082 | 55158 | + | GT4 |
| CAZyme | HRGMv2_3869_6 | HRGMv2_3869_6_40 | 55169 | 55924 | + | GT2 |
Gene ID: HRGMv2_3869_6_28
Type: TC
Location: 39232 - 40311 (+)
Type: TC
Location: 39232 - 40311 (+)
Gene ID: HRGMv2_3869_6_29
Type: pfam
Location: 40334 - 41650 (+)
Type: pfam
Location: 40334 - 41650 (+)
Gene ID: HRGMv2_3869_6_30
Type: TC
Location: 42051 - 44468 (+)
Type: TC
Location: 42051 - 44468 (+)
Gene ID: HRGMv2_3869_6_31
Type: pfam
Location: 44474 - 45601 (+)
Type: pfam
Location: 44474 - 45601 (+)
Gene ID: HRGMv2_3869_6_32
Type: pfam
Location: 45778 - 46776 (+)
Type: pfam
Location: 45778 - 46776 (+)
Gene ID: HRGMv2_3869_6_33
Type: TC
Location: 47080 - 48444 (+)
Type: TC
Location: 47080 - 48444 (+)
Gene ID: HRGMv2_3869_6_34
Type: CAZyme
Location: 48503 - 49297 (+)
Type: CAZyme
Location: 48503 - 49297 (+)
Gene ID: HRGMv2_3869_6_35
Type:
Location: 49328 - 50593 (+)
Type:
Location: 49328 - 50593 (+)
Gene ID: HRGMv2_3869_6_36
Type: CAZyme
Location: 50667 - 51728 (+)
Type: CAZyme
Location: 50667 - 51728 (+)
Gene ID: HRGMv2_3869_6_37
Type:
Location: 51740 - 52738 (+)
Type:
Location: 51740 - 52738 (+)
Gene ID: HRGMv2_3869_6_38
Type: pfam
Location: 52785 - 54032 (+)
Type: pfam
Location: 52785 - 54032 (+)
Gene ID: HRGMv2_3869_6_39
Type: CAZyme
Location: 54082 - 55158 (+)
Type: CAZyme
Location: 54082 - 55158 (+)
Gene ID: HRGMv2_3869_6_40
Type: CAZyme
Location: 55169 - 55924 (+)
Type: CAZyme
Location: 55169 - 55924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp905204385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.