PROTEIN: HRGMv2_3869_6_35
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Protein File & Metadata
Source:
HRGMv2_3869_6_35.pdb
Genome ID:
Protein ID:
HRGMv2_3869_6_35
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Protein Sequence
MTLRNFNTES ILHFLALGGI FTSGIVFEFL PVSISQFCIL LLFVVLVALR RIYLHRGLFL 60 ALIYALFVTV INIDKVEGIN IVTYIRTCIY IIAYYSYVSY LGRDKLPDVY KKYITGCYIF 120 SIIAIVQEIG FLLHIPILYD VSYIDGVPRN IVTTMGLLQV YSLTLEPVFF VGLILPCMSQ 180 IIQNLFIKDE FLVPISRKQK IVISIAFLLT FSFTAYVCLL LIFSYYYLKQ LNFNFRSVFY 240 SILIVAFVVS IFFVIPGNMK NKFESLFAER EALTTSVENL SAFAIISNFL IAKDAANDHY 300 LGTGFFTNKN NFDAYINDHF KITNDTIILN RLDGGSMYIK ILSEYGYIGL FLFFLLFYLN 360 RSKRMDNAYS LLNNCLFITI LVLFLRTADY VSPILTYIIV VFFFTANDRL ATSEEPIPVE 420 S 421
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44067-F1-model_v4 | 3 | 405 | 2 | 399 | 0.6423 |
0.6831 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 421 | 10 | 467 | 0.5508 |
0.7121 |
| UII34295.1 | GT4 | 1 | 421 | 8 | 779 | 0.5219 |
0.6844 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 2 | 421 | 15 | 466 | 0.5187 |
0.6975 |
| AF-D9S8K7-F1-model_v4 | GT4 | 2 | 421 | 5 | 719 | 0.5067 |
0.6669 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 2 | 414 | 379 | 792 | 0.4909 |
0.6625 |
| AF-A0A160T1R3-F1-model_v4 | GH39 | 1 | 416 | 613 | 1041 | 0.4814 |
0.6977 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 1 | 421 | 10 | 467 | 0.5508 |
0.7121 |
| D5MJ04 | GT9 | 1 | 421 | 17 | 448 | 0.5338 |
0.6965 |
| UII34295.1 | GT4 | 1 | 421 | 8 | 779 | 0.5219 |
0.6844 |
| B8IGI7 | GH16_7 | 2 | 421 | 15 | 466 | 0.5187 |
0.6975 |
| D9S8K7 | GT4 | 2 | 421 | 5 | 719 | 0.5067 |
0.6669 |
| A0A5B7R2V6 | GH5_39 | 2 | 414 | 379 | 792 | 0.4909 |
0.6625 |
| A0A160T1R3 | GH39 | 1 | 416 | 613 | 1041 | 0.4814 |
0.6977 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44067-F1-model_v4 | 3 | 405 | 2 | 399 | 0.6423 |
0.6831 |
| AF-Q00474-F1-model_v4 | 27 | 408 | 3 | 390 | 0.5746 |
0.6365 |