Cluster: HRGMv2_3867_CGC21
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3867
- CGC Family ID: CGCFAM_00189
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3867_8 | HRGMv2_3867_8_14 | 23763 | 24932 | + | 9.B.146.1.4 |
| TC | HRGMv2_3867_8 | HRGMv2_3867_8_15 | 24977 | 25795 | + | 1.B.18.3.3 |
| TC | HRGMv2_3867_8 | HRGMv2_3867_8_16 | 25815 | 28256 | + | 8.A.3.3.4 |
| pfam | HRGMv2_3867_8 | HRGMv2_3867_8_17 | 28421 | 29701 | + | Wzy_C |
| pfam | HRGMv2_3867_8 | HRGMv2_3867_8_18 | 29705 | 30778 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_19 | 30775 | 31851 | + | GT4 |
| pfam | HRGMv2_3867_8 | HRGMv2_3867_8_20 | 31995 | 33248 | + | Wzy_C |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_21 | 33245 | 34363 | + | GT4 |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_22 | 34576 | 35547 | + | GT2 |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_23 | 35544 | 36710 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_3867_8 | HRGMv2_3867_8_24 | 36710 | 37255 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_25 | 37239 | 38144 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3867_8 | HRGMv2_3867_8_26 | 38302 | 39384 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_27 | 39396 | 40415 | + | GT2 |
| pfam | HRGMv2_3867_8 | HRGMv2_3867_8_28 | 40472 | 41416 | + | ATPgrasp_TupA |
| CAZyme | HRGMv2_3867_8 | HRGMv2_3867_8_29 | 41587 | 42363 | + | GT2 |
Gene ID: HRGMv2_3867_8_14
Type: TC
Location: 23763 - 24932 (+)
Type: TC
Location: 23763 - 24932 (+)
Gene ID: HRGMv2_3867_8_15
Type: TC
Location: 24977 - 25795 (+)
Type: TC
Location: 24977 - 25795 (+)
Gene ID: HRGMv2_3867_8_16
Type: TC
Location: 25815 - 28256 (+)
Type: TC
Location: 25815 - 28256 (+)
Gene ID: HRGMv2_3867_8_17
Type: pfam
Location: 28421 - 29701 (+)
Type: pfam
Location: 28421 - 29701 (+)
Gene ID: HRGMv2_3867_8_18
Type: pfam
Location: 29705 - 30778 (+)
Type: pfam
Location: 29705 - 30778 (+)
Gene ID: HRGMv2_3867_8_19
Type: CAZyme
Location: 30775 - 31851 (+)
Type: CAZyme
Location: 30775 - 31851 (+)
Gene ID: HRGMv2_3867_8_20
Type: pfam
Location: 31995 - 33248 (+)
Type: pfam
Location: 31995 - 33248 (+)
Gene ID: HRGMv2_3867_8_21
Type: CAZyme
Location: 33245 - 34363 (+)
Type: CAZyme
Location: 33245 - 34363 (+)
Gene ID: HRGMv2_3867_8_22
Type: CAZyme
Location: 34576 - 35547 (+)
Type: CAZyme
Location: 34576 - 35547 (+)
Gene ID: HRGMv2_3867_8_23
Type: CAZyme
Location: 35544 - 36710 (+)
Type: CAZyme
Location: 35544 - 36710 (+)
Gene ID: HRGMv2_3867_8_24
Type:
Location: 36710 - 37255 (+)
Type:
Location: 36710 - 37255 (+)
Gene ID: HRGMv2_3867_8_25
Type: CAZyme
Location: 37239 - 38144 (+)
Type: CAZyme
Location: 37239 - 38144 (+)
Gene ID: HRGMv2_3867_8_26
Type:
Location: 38302 - 39384 (+)
Type:
Location: 38302 - 39384 (+)
Gene ID: HRGMv2_3867_8_27
Type: CAZyme
Location: 39396 - 40415 (+)
Type: CAZyme
Location: 39396 - 40415 (+)
Gene ID: HRGMv2_3867_8_28
Type: pfam
Location: 40472 - 41416 (+)
Type: pfam
Location: 40472 - 41416 (+)
Gene ID: HRGMv2_3867_8_29
Type: CAZyme
Location: 41587 - 42363 (+)
Type: CAZyme
Location: 41587 - 42363 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
JAGBWK01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.