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PROTEIN: HRGMv2_3867_8_24

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Protein File & Metadata
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Source:
HRGMv2_3867_8_24.pdb
Genome ID:
HRGMv2_3867
Protein ID:
HRGMv2_3867_8_24

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNLADYKEEK   PHRVKRIVWT   VINRTMFRWM   GGRLFWPLRR   GLLRMFGGKI   ASDSLIYASC 60
RIYAPWLLNV   GRVCVGPNTE   IYNKAPVEIG   DDSVISQGAF   LCSASHDTSD   LMMPLVAKPI 120
TIGKSVWVAA   NVFVGPGVTL   NDGAVAAACA   VVVKDVAPWT   IVGGNPAREL   KKRVIKHGFE 180
K 181
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD2-F1-model_v4 1 177 2 182 0.925 0.9635
AF-H9L4A1-F1-model_v4 1 180 2 184 0.9227 0.9511
AF-K0EU34-F1-model_v4 6 173 7 178 0.8481 0.9245
AF-Q54ED9-F1-model_v4 7 177 9 181 0.8457 0.9146
AF-A0A132Z1S6-F1-model_v4 6 177 15 189 0.8324 0.9134
AF-P77791-F1-model_v4 7 173 14 183 0.8287 0.9207
AF-Q32J39-F1-model_v4 7 173 15 183 0.8286 0.9206
AF-A0A0H3GKK7-F1-model_v4 7 180 15 188 0.8278 0.8966
AF-Q8ZRA8-F1-model_v4 7 173 15 183 0.8264 0.9184
AF-Q552S7-F1-model_v4 7 180 17 190 0.8236 0.8964
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A517YPZ3-F1-model_v4 GT2 1 179 307 490 0.6401 0.9536
A0A7M2X016 GT2 1 180 341 523 0.6323 0.957
AF-A0A6P1YLS6-F1-model_v4 GT4 1 180 10 193 0.6265 0.9589
AF-A0A518C0G7-F1-model_v4 GT2 1 176 338 515 0.619 0.9502
AF-A0A1Z4N893-F1-model_v4 GT2 1 179 293 475 0.6168 0.9282
A0A9W4F949 GT2 1 180 294 479 0.6117 0.9165
D8DUW3 GT2 12 180 250 416 0.607 0.9293
AF-A0A402CU73-F1-model_v4 GT2 14 177 341 523 0.4924 0.8085
AF-A0A0S2M2B5-F1-model_v4 GT4 32 176 368 561 0.4785 0.9043
AF-C1D4M7-F1-model_v4 GT2 29 177 377 549 0.4736 0.8644
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A517YPZ3 GT2 1 179 307 490 0.6401 0.9536
A0A7M2X016 GT2 1 180 341 523 0.6323 0.957
A0A6P1YLS6 GT4 1 180 10 193 0.6265 0.9589
A0A518C0G7 GT2 1 176 338 515 0.619 0.9502
A0A9W4F949 GT2 1 180 294 479 0.6117 0.9165
D8DUW3 GT2 12 180 250 416 0.607 0.9293
A0A402CU73 GT2 14 177 341 523 0.4924 0.8085
A0A0S2M2B5 GT4 32 176 368 561 0.4785 0.9043
C1D4M7 GT2 29 177 377 549 0.4736 0.8644
A0A5B8KER9 GT4 25 176 429 602 0.4671 0.8588
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3ect-assembly1.cif.gz_A 8 175 8 176 0.8379 0.9089
2p2o-assembly1.cif.gz_A 7 174 14 184 0.8295 0.9198
3nz2-assembly5.cif.gz_I 7 175 14 184 0.8266 0.9101
3igj-assembly1.cif.gz_A 7 175 14 186 0.8208 0.9103
6ag8-assembly1.cif.gz_C 7 173 14 182 0.8204 0.9105
3srt-assembly2.cif.gz_B 7 175 15 187 0.819 0.911
5u2k-assembly1.cif.gz_A 6 180 14 190 0.8167 0.8877
4egg-assembly1.cif.gz_A 6 178 15 188 0.8131 0.8893
4dcl-assembly1.cif.gz_A 6 178 14 188 0.8128 0.8889
3vbk-assembly1.cif.gz_E 30 181 1 181 0.7244 0.887
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0ACD3-F1-model_v4 1 177 2 182 0.9257 0.9641
AF-P0ACD2-F1-model_v4 1 177 2 182 0.925 0.9635
AF-P37515-F1-model_v4 7 173 16 184 0.8324 0.926
AF-P77791-F1-model_v4 7 173 14 183 0.8287 0.9207
AF-Q552S7-F1-model_v4 7 180 17 190 0.8236 0.8964
AF-P08632-F1-model_v4 6 175 15 187 0.8222 0.9141
AF-P28266-F1-model_v4 6 171 15 183 0.8212 0.9176
AF-Q54UU2-F1-model_v4 7 180 19 191 0.8186 0.8987
AF-Q4L967-F1-model_v4 6 178 14 190 0.8159 0.8992
AF-P40892-F1-model_v4 6 178 15 190 0.8154 0.9059
Download Full SwissProt Results