Cluster: HRGMv2_3866_CGC25
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 17
- Substrate: xylan
- Genome ID: HRGMv2_3866
- CGC Family ID: CGCFAM_00238
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_19 | 14291 | 16696 | - | 1.B.14.6.5 |
| pfam | HRGMv2_3866_9 | HRGMv2_3866_9_20 | 16973 | 17578 | - | OMP_b-brl | OMP_b-brl_2 |
| peptidase | HRGMv2_3866_9 | HRGMv2_3866_9_21 | 17610 | 18482 | - | G05.UPW |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_22 | 18830 | 20746 | - | PL17 |
| sulfatase | HRGMv2_3866_9 | HRGMv2_3866_9_23 | 20784 | 22529 | - | S1_36 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_24 | 22616 | 24883 | - | GH92 |
| NULL(UNKNOWN) | HRGMv2_3866_9 | HRGMv2_3866_9_25 | 25008 | 26417 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_26 | 26436 | 28802 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_3866_9 | HRGMv2_3866_9_27 | 28913 | 31498 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_28 | 31811 | 35419 | - | GH2 |
| pfam | HRGMv2_3866_9 | HRGMv2_3866_9_29 | 35497 | 36228 | - | DUF3823 |
| pfam | HRGMv2_3866_9 | HRGMv2_3866_9_30 | 36247 | 38271 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3866_9 | HRGMv2_3866_9_31 | 38337 | 41531 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | HRGMv2_3866_9 | HRGMv2_3866_9_32 | 41904 | 42134 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3866_9 | HRGMv2_3866_9_33 | 42252 | 43328 | + | AlkZ-like |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_34 | 43477 | 45057 | - | CBM91 | GH43_10 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_35 | 45448 | 47205 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_36 | 47390 | 48265 | - | CE1 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_37 | 48268 | 49425 | - | GH10 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_38 | 49517 | 50848 | - | GH43_2 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_39 | 50859 | 52007 | - | CE1 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_40 | 52040 | 53323 | - | GH8 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_41 | 53346 | 54191 | - | CE6 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_42 | 54274 | 55629 | - | CBM6 | GH43_29 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_43 | 55654 | 56988 | - | CBM6 | GH43_29 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_44 | 57004 | 58944 | - | GH97 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_45 | 58965 | 61412 | - | GH31_4 |
| CAZyme | HRGMv2_3866_9 | HRGMv2_3866_9_46 | 61658 | 63358 | - | GH10 |
Gene ID: HRGMv2_3866_9_19
Type: TC
Location: 14291 - 16696 (-)
Type: TC
Location: 14291 - 16696 (-)
Gene ID: HRGMv2_3866_9_20
Type: pfam
Location: 16973 - 17578 (-)
Type: pfam
Location: 16973 - 17578 (-)
Gene ID: HRGMv2_3866_9_21
Type: peptidase
Location: 17610 - 18482 (-)
Type: peptidase
Location: 17610 - 18482 (-)
Gene ID: HRGMv2_3866_9_22
Type: CAZyme
Location: 18830 - 20746 (-)
Type: CAZyme
Location: 18830 - 20746 (-)
Gene ID: HRGMv2_3866_9_23
Type: sulfatase
Location: 20784 - 22529 (-)
Type: sulfatase
Location: 20784 - 22529 (-)
Gene ID: HRGMv2_3866_9_24
Type: CAZyme
Location: 22616 - 24883 (-)
Type: CAZyme
Location: 22616 - 24883 (-)
Gene ID: HRGMv2_3866_9_25
Type:
Location: 25008 - 26417 (-)
Type:
Location: 25008 - 26417 (-)
Gene ID: HRGMv2_3866_9_26
Type: CAZyme
Location: 26436 - 28802 (-)
Type: CAZyme
Location: 26436 - 28802 (-)
Gene ID: HRGMv2_3866_9_27
Type:
Location: 28913 - 31498 (-)
Type:
Location: 28913 - 31498 (-)
Gene ID: HRGMv2_3866_9_28
Type: CAZyme
Location: 31811 - 35419 (-)
Type: CAZyme
Location: 31811 - 35419 (-)
Gene ID: HRGMv2_3866_9_29
Type: pfam
Location: 35497 - 36228 (-)
Type: pfam
Location: 35497 - 36228 (-)
Gene ID: HRGMv2_3866_9_30
Type: pfam
Location: 36247 - 38271 (-)
Type: pfam
Location: 36247 - 38271 (-)
Gene ID: HRGMv2_3866_9_31
Type: TC
Location: 38337 - 41531 (-)
Type: TC
Location: 38337 - 41531 (-)
Gene ID: HRGMv2_3866_9_32
Type:
Location: 41904 - 42134 (+)
Type:
Location: 41904 - 42134 (+)
Gene ID: HRGMv2_3866_9_33
Type: pfam
Location: 42252 - 43328 (+)
Type: pfam
Location: 42252 - 43328 (+)
Gene ID: HRGMv2_3866_9_34
Type: CAZyme
Location: 43477 - 45057 (-)
Type: CAZyme
Location: 43477 - 45057 (-)
Gene ID: HRGMv2_3866_9_35
Type: CAZyme
Location: 45448 - 47205 (-)
Type: CAZyme
Location: 45448 - 47205 (-)
Gene ID: HRGMv2_3866_9_36
Type: CAZyme
Location: 47390 - 48265 (-)
Type: CAZyme
Location: 47390 - 48265 (-)
Gene ID: HRGMv2_3866_9_37
Type: CAZyme
Location: 48268 - 49425 (-)
Type: CAZyme
Location: 48268 - 49425 (-)
Gene ID: HRGMv2_3866_9_38
Type: CAZyme
Location: 49517 - 50848 (-)
Type: CAZyme
Location: 49517 - 50848 (-)
Gene ID: HRGMv2_3866_9_39
Type: CAZyme
Location: 50859 - 52007 (-)
Type: CAZyme
Location: 50859 - 52007 (-)
Gene ID: HRGMv2_3866_9_40
Type: CAZyme
Location: 52040 - 53323 (-)
Type: CAZyme
Location: 52040 - 53323 (-)
Gene ID: HRGMv2_3866_9_41
Type: CAZyme
Location: 53346 - 54191 (-)
Type: CAZyme
Location: 53346 - 54191 (-)
Gene ID: HRGMv2_3866_9_42
Type: CAZyme
Location: 54274 - 55629 (-)
Type: CAZyme
Location: 54274 - 55629 (-)
Gene ID: HRGMv2_3866_9_43
Type: CAZyme
Location: 55654 - 56988 (-)
Type: CAZyme
Location: 55654 - 56988 (-)
Gene ID: HRGMv2_3866_9_44
Type: CAZyme
Location: 57004 - 58944 (-)
Type: CAZyme
Location: 57004 - 58944 (-)
Gene ID: HRGMv2_3866_9_45
Type: CAZyme
Location: 58965 - 61412 (-)
Type: CAZyme
Location: 58965 - 61412 (-)
Gene ID: HRGMv2_3866_9_46
Type: CAZyme
Location: 61658 - 63358 (-)
Type: CAZyme
Location: 61658 - 63358 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.