PROTEIN: HRGMv2_3866_9_25
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Protein File & Metadata
Source:
HRGMv2_3866_9_25.pdb
Genome ID:
Protein ID:
HRGMv2_3866_9_25
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Protein Sequence
MNRFIRFKAL FSIVLCFSIY FISAKNKPKE YIHFIMYGQS LSTGHESWAT ISAENVKGNY 60 MIGDQIWINY GNKALNELQP LRGSVANATK DIVECPLLGT ANHIQKKFKN RLNIIATSAG 120 TSGEPIEDLS KESQVSTYYQ HYLTALESAS AIAKNEDAVV NCPAIFWMQG EWNYQGHGNG 180 LVKDSKPTFD KDEYKSLMIR LKDNMQADAM SVYGQYNKPY FYTYQVGAQY TKGKSLSIGM 240 AQLEASNEYD DIICAGPAYP VTDVGGHLDA NGYRWYGEML GKVYYKTKVL GEDFKPLQPY 300 EVSRDTSDTR NILIRFLVPQ LPLVLDTLTL AKEKDFGFEV YLDDTRQKIN KVSIQNNTVI 360 LTCDNDLKGL VEVIYGSSNT RGHGNLRDSD DYKAFFPYED LDKKDKSGQY IYPRPDNKQL 420 RPAIEPKDSE GNIIYNKPYP LYNFSVAFYY KINQYETAYT VPNLKKKTD 469
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-I1NFX6-F1-model_v4 | 21 | 290 | 6 | 256 | 0.6295 |
0.8383 |
| AF-A0A1D6LC91-F1-model_v4 | 21 | 292 | 21 | 271 | 0.6083 |
0.8372 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-H2J9I4-F1-model_v4 | CE0 | 28 | 458 | 112 | 517 | 0.6928 |
0.8419 |
| AF-A3DJE8-F1-model_v4 | CE0 | 28 | 458 | 109 | 511 | 0.69 |
0.841 |
| AF-A0A060R8C4-F1-model_v4 | CE20 | 22 | 451 | 28 | 428 | 0.6422 |
0.7257 |
| AF-A0A2L0EM53-F1-model_v4 | CBM2 | 28 | 458 | 210 | 618 | 0.6372 |
0.8325 |
| AF-A0A7G9BSK0-F1-model_v4 | CE20 | 22 | 453 | 28 | 434 | 0.631 |
0.7113 |
| AF-A0A4U7JNC1-F1-model_v4 | CBM6 | 1 | 452 | 171 | 653 | 0.6293 |
0.7635 |
| A0A420VY27 | CE20 | 22 | 453 | 28 | 434 | 0.6292 |
0.7096 |
| AF-W0ETZ4-F1-model_v4 | CE20 | 22 | 453 | 41 | 448 | 0.6211 |
0.7101 |
| AF-H2BCJ2-F1-model_v4 | CE20 | 23 | 452 | 27 | 446 | 0.6201 |
0.6852 |
| AF-A0A5K7S6D1-F1-model_v4 | CE20 | 22 | 453 | 59 | 462 | 0.6178 |
0.7184 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A060R8C4 | CE20 | 22 | 451 | 28 | 428 | 0.6422 |
0.7257 |
| A0A2L0EM53 | CBM2 | 28 | 458 | 210 | 618 | 0.6372 |
0.8325 |
| A0A4U7JNC1 | CBM6 | 1 | 452 | 171 | 653 | 0.6293 |
0.7635 |
| A0A420VY27 | CE20 | 22 | 453 | 28 | 434 | 0.6292 |
0.7096 |
| A0A2I2K935 | CE20 | 23 | 453 | 31 | 451 | 0.6221 |
0.6906 |
| H2BCJ2 | CE20 | 23 | 452 | 27 | 446 | 0.6201 |
0.6852 |
| A0A5K7S6D1 | CE20 | 22 | 453 | 59 | 462 | 0.6178 |
0.7184 |
| A0A7X9TF23 | CE20 | 23 | 458 | 55 | 462 | 0.6169 |
0.7134 |
| A0A3G8X8P1 | CE20 | 23 | 453 | 55 | 465 | 0.6147 |
0.7056 |
| D4NWE8 | CE20 | 21 | 462 | 39 | 506 | 0.6146 |
0.6886 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7kmm-assembly1.cif.gz_A | 23 | 453 | 36 | 434 | 0.6285 |
0.7189 |
| 1zmb-assembly3.cif.gz_F | 30 | 399 | 1 | 245 | 0.5906 |
0.8539 |
| 3pt5-assembly1.cif.gz_A | 28 | 291 | 4 | 320 | 0.5474 |
0.7856 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HAT2-F1-model_v4 | 23 | 463 | 66 | 523 | 0.6152 |
0.6991 |
| AF-Q5RFU0-F1-model_v4 | 23 | 464 | 66 | 523 | 0.6146 |
0.6969 |
| AF-D5EXZ4-F1-model_v4 | 25 | 426 | 39 | 366 | 0.4103 |
0.676 |