Cluster: HRGMv2_3866_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3866
- CGC Family ID: CGCFAM_10473
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3866_3 | HRGMv2_3866_3_72 | 87250 | 89460 | + | 1.B.14.14.1 |
| TC | HRGMv2_3866_3 | HRGMv2_3866_3_73 | 89484 | 90095 | + | 4.B.1.1.1 |
| pfam | HRGMv2_3866_3 | HRGMv2_3866_3_74 | 90092 | 90739 | + | TPK_catalytic | Thi_PPkinase_C |
| TC | HRGMv2_3866_3 | HRGMv2_3866_3_75 | 90865 | 91536 | + | 9.B.27.2.3 |
| STP | HRGMv2_3866_3 | HRGMv2_3866_3_76 | 91687 | 93012 | + | Pyr_redox_2 |
| CAZyme | HRGMv2_3866_3 | HRGMv2_3866_3_77 | 93034 | 93846 | - | GT2 |
| CAZyme | HRGMv2_3866_3 | HRGMv2_3866_3_78 | 93851 | 94687 | - | GT14 |
| CAZyme | HRGMv2_3866_3 | HRGMv2_3866_3_79 | 94698 | 95744 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3866_3 | HRGMv2_3866_3_80 | 95831 | 96673 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3866_3 | HRGMv2_3866_3_81 | 96681 | 97703 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3866_3 | HRGMv2_3866_3_82 | 97690 | 98967 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3866_3 | HRGMv2_3866_3_83 | 98974 | 100035 | - | GT2 |
| CAZyme | HRGMv2_3866_3 | HRGMv2_3866_3_84 | 100048 | 101115 | - | GT4 |
| TC | HRGMv2_3866_3 | HRGMv2_3866_3_85 | 101246 | 102673 | + | 9.B.18.1.3 |
Gene ID: HRGMv2_3866_3_72
Type: TC
Location: 87250 - 89460 (+)
Type: TC
Location: 87250 - 89460 (+)
Gene ID: HRGMv2_3866_3_73
Type: TC
Location: 89484 - 90095 (+)
Type: TC
Location: 89484 - 90095 (+)
Gene ID: HRGMv2_3866_3_74
Type: pfam
Location: 90092 - 90739 (+)
Type: pfam
Location: 90092 - 90739 (+)
Gene ID: HRGMv2_3866_3_75
Type: TC
Location: 90865 - 91536 (+)
Type: TC
Location: 90865 - 91536 (+)
Gene ID: HRGMv2_3866_3_76
Type: STP
Location: 91687 - 93012 (+)
Type: STP
Location: 91687 - 93012 (+)
Gene ID: HRGMv2_3866_3_77
Type: CAZyme
Location: 93034 - 93846 (-)
Type: CAZyme
Location: 93034 - 93846 (-)
Gene ID: HRGMv2_3866_3_78
Type: CAZyme
Location: 93851 - 94687 (-)
Type: CAZyme
Location: 93851 - 94687 (-)
Gene ID: HRGMv2_3866_3_79
Type: CAZyme
Location: 94698 - 95744 (-)
Type: CAZyme
Location: 94698 - 95744 (-)
Gene ID: HRGMv2_3866_3_80
Type:
Location: 95831 - 96673 (-)
Type:
Location: 95831 - 96673 (-)
Gene ID: HRGMv2_3866_3_81
Type: CAZyme
Location: 96681 - 97703 (-)
Type: CAZyme
Location: 96681 - 97703 (-)
Gene ID: HRGMv2_3866_3_82
Type:
Location: 97690 - 98967 (-)
Type:
Location: 97690 - 98967 (-)
Gene ID: HRGMv2_3866_3_83
Type: CAZyme
Location: 98974 - 100035 (-)
Type: CAZyme
Location: 98974 - 100035 (-)
Gene ID: HRGMv2_3866_3_84
Type: CAZyme
Location: 100048 - 101115 (-)
Type: CAZyme
Location: 100048 - 101115 (-)
Gene ID: HRGMv2_3866_3_85
Type: TC
Location: 101246 - 102673 (+)
Type: TC
Location: 101246 - 102673 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.