PROTEIN: HRGMv2_3866_3_80
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Protein File & Metadata
Source:
HRGMv2_3866_3_80.pdb
Genome ID:
Protein ID:
HRGMv2_3866_3_80
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Protein Sequence
MTKRKIAILL RVYDRIEDLK YNLQIIKNTW NSFDYYLIVV SNGNPDGYII DENLKPYIDD 60 LVILDHNSGH RKGSAQLLQE GRKHIPTCDY TIILEADTWI YSDRIIAKYI AKMDNHQQNT 120 VWASAGWYDK DYSLAVDCAI IKTDFILAHD TLFDIDLYPE CYIANFLQKT GMNFVFITEN 180 MPVHIPSYIP VYPYIDDIKN KRFYIFPKSK MITHHIEFLK NGMSQKKAYF NIVSGVNYFQ 240 EEKVQNRKWK LLKIKFWISL SGLFPKKSWI KPKSYRILDS 280
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O14466-F1-model_v4 | 3 | 280 | 1 | 234 | 0.6123 |
0.686 |
| AF-G4VIT8-F1-model_v4 | 3 | 280 | 1 | 235 | 0.6097 |
0.6831 |
| AF-C0NU34-F1-model_v4 | 1 | 280 | 3 | 243 | 0.6055 |
0.6739 |
| AF-Q6K8V2-F1-model_v4 | 1 | 250 | 52 | 313 | 0.6053 |
0.7303 |
| AF-Q9VIU7-F1-model_v4 | 1 | 280 | 2 | 239 | 0.6048 |
0.6763 |
| AF-A0A0D2EYM8-F1-model_v4 | 1 | 280 | 3 | 243 | 0.6036 |
0.6713 |
| AF-I1KLS1-F1-model_v4 | 1 | 280 | 6 | 241 | 0.601 |
0.6785 |
| AF-Q9LM93-F1-model_v4 | 1 | 280 | 9 | 244 | 0.6008 |
0.6819 |
| AF-A0A0K0DVP1-F1-model_v4 | 1 | 280 | 2 | 240 | 0.6006 |
0.6714 |
| AF-A0A077ZBS5-F1-model_v4 | 1 | 280 | 5 | 241 | 0.6 |
0.676 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518B9K5-F1-model_v4 | GT0 | 2 | 242 | 1 | 257 | 0.6601 |
0.7611 |
| AF-A0A2Z4RT75-F1-model_v4 | GT2 | 1 | 251 | 4 | 264 | 0.6557 |
0.7278 |
| AF-A0A4P6G808-F1-model_v4 | GT2 | 1 | 254 | 6 | 264 | 0.6556 |
0.7187 |
| AF-A0A2S0L0M0-F1-model_v4 | GT2 | 1 | 242 | 1 | 252 | 0.6545 |
0.7488 |
| AF-A0A6I6VAZ1-F1-model_v4 | GT2 | 1 | 241 | 6 | 266 | 0.6533 |
0.757 |
| AF-A0A0K1QH99-F1-model_v4 | GT2 | 1 | 240 | 4 | 261 | 0.6526 |
0.7497 |
| AF-A0A1J0ERQ0-F1-model_v4 | GT2 | 2 | 243 | 7 | 263 | 0.6518 |
0.7456 |
| AF-A0A1H0CJA2-F1-model_v4 | GT2 | 1 | 247 | 6 | 261 | 0.6518 |
0.7293 |
| AF-A0A6I6TAN0-F1-model_v4 | GT2 | 1 | 243 | 5 | 267 | 0.6517 |
0.7496 |
| AF-A0A1P8EP59-F1-model_v4 | GT2 | 1 | 243 | 7 | 268 | 0.6516 |
0.7509 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BDG72344.1 | GT2 | 1 | 242 | 1 | 249 | 0.67 |
0.7502 |
| WED26873.1 | GT2 | 1 | 238 | 1 | 271 | 0.6698 |
0.7922 |
| A0A5K8A5C0 | GT2 | 1 | 242 | 2 | 257 | 0.6643 |
0.7608 |
| QLC25233.1 | GT2 | 1 | 266 | 2 | 261 | 0.6574 |
0.711 |
| A0A2S0L0M0 | GT2 | 1 | 242 | 1 | 252 | 0.6545 |
0.7488 |
| A0A370GMB8 | GT2 | 1 | 242 | 1 | 262 | 0.6496 |
0.752 |
| A0A0H4IYS2 | GT2 | 2 | 242 | 2 | 255 | 0.6474 |
0.7433 |
| A0A0K0SX09 | GT2 | 1 | 242 | 2 | 264 | 0.6426 |
0.7469 |
| D3SDK6 | GT2 | 2 | 242 | 7 | 272 | 0.6338 |
0.746 |
| A0A0N9WBP7 | GT2 | 2 | 241 | 7 | 266 | 0.6301 |
0.7527 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ayl-assembly1.cif.gz_A | 4 | 224 | 1 | 210 | 0.6349 |
0.7462 |
| 6p61-assembly3.cif.gz_C | 2 | 218 | 1 | 190 | 0.6324 |
0.772 |
| 6p61-assembly2.cif.gz_B | 2 | 215 | 1 | 191 | 0.6313 |
0.7688 |
| 2p6w-assembly1.cif.gz_A | 4 | 230 | 1 | 206 | 0.6169 |
0.7324 |
| 2p72-assembly2.cif.gz_B | 4 | 228 | 1 | 204 | 0.6157 |
0.7339 |
| 2p72-assembly1.cif.gz_A | 4 | 227 | 1 | 199 | 0.6137 |
0.7388 |
| 4ayj-assembly1.cif.gz_A | 4 | 216 | 1 | 231 | 0.6063 |
0.7356 |
| 1vgt-assembly1.cif.gz_B | 4 | 232 | 1 | 217 | 0.5982 |
0.6952 |
| 3usq-assembly1.cif.gz_A | 3 | 242 | 1 | 245 | 0.5912 |
0.6783 |
| 5y7f-assembly1.cif.gz_A | 4 | 242 | 1 | 260 | 0.5907 |
0.6948 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O14466-F1-model_v4 | 3 | 280 | 1 | 234 | 0.6123 |
0.686 |
| AF-Q9VIU7-F1-model_v4 | 1 | 280 | 2 | 239 | 0.6048 |
0.6763 |
| AF-Q5JBG6-F1-model_v4 | 4 | 222 | 1 | 227 | 0.6037 |
0.719 |
| AF-A0PXS4-F1-model_v4 | 2 | 247 | 1 | 231 | 0.6023 |
0.6799 |
| AF-Q9LM93-F1-model_v4 | 1 | 280 | 9 | 244 | 0.6008 |
0.6819 |
| AF-P9WKG9-F1-model_v4 | 1 | 244 | 2 | 231 | 0.5918 |
0.6711 |
| AF-A5U8Q7-F1-model_v4 | 1 | 244 | 2 | 231 | 0.5913 |
0.6706 |
| AF-A6LPN9-F1-model_v4 | 5 | 236 | 1 | 226 | 0.5896 |
0.6728 |
| AF-Q54LP3-F1-model_v4 | 1 | 280 | 15 | 252 | 0.589 |
0.6749 |
| AF-P71054-F1-model_v4 | 1 | 262 | 1 | 274 | 0.5872 |
0.6401 |