dbCAN Logo

Cluster: HRGMv2_3864_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3864_12 HRGMv2_3864_12_42 54576 56333 + 2.A.81.1.2
TF HRGMv2_3864_12 HRGMv2_3864_12_43 56732 57175 - FUR
TC HRGMv2_3864_12 HRGMv2_3864_12_44 57269 59221 - 3.A.3.6.10
pfam HRGMv2_3864_12 HRGMv2_3864_12_45 59537 59809 + Cpn10
pfam HRGMv2_3864_12 HRGMv2_3864_12_46 59929 61566 + Cpn60_TCP1
CAZyme HRGMv2_3864_12 HRGMv2_3864_12_47 61759 64992 + GH95
CAZyme HRGMv2_3864_12 HRGMv2_3864_12_48 65166 67016 + GH16_3
Gene ID: HRGMv2_3864_12_42
Type: TC
Location: 54576 - 56333 (+)
Gene ID: HRGMv2_3864_12_43
Type: TF
Location: 56732 - 57175 (-)
Gene ID: HRGMv2_3864_12_44
Type: TC
Location: 57269 - 59221 (-)
Gene ID: HRGMv2_3864_12_45
Type: pfam
Location: 59537 - 59809 (+)
Gene ID: HRGMv2_3864_12_46
Type: pfam
Location: 59929 - 61566 (+)
Gene ID: HRGMv2_3864_12_47
Type: CAZyme
Location: 61759 - 64992 (+)
Gene ID: HRGMv2_3864_12_48
Type: CAZyme
Location: 65166 - 67016 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List