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Cluster: HRGMv2_3864_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3864_6 HRGMv2_3864_6_52 65620 66390 + 8.A.3.2.3
pfam HRGMv2_3864_6 HRGMv2_3864_6_53 66441 67328 + ParBc | HTH_ParB
pfam HRGMv2_3864_6 HRGMv2_3864_6_54 67377 68201 + DUF5683
CAZyme HRGMv2_3864_6 HRGMv2_3864_6_55 68228 69637 + GH23
STP HRGMv2_3864_6 HRGMv2_3864_6_56 69709 71982 + HD
TC HRGMv2_3864_6 HRGMv2_3864_6_57 72092 75115 - 2.A.6.4.3
NULL(UNKNOWN) HRGMv2_3864_6 HRGMv2_3864_6_58 75279 75470 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3864_6 HRGMv2_3864_6_59 76128 77492 + 2.A.62.1.3
pfam HRGMv2_3864_6 HRGMv2_3864_6_60 77513 78160 + OMP_b-brl | OMP_b-brl_2
pfam HRGMv2_3864_6 HRGMv2_3864_6_61 78182 78457 + ABM
TC HRGMv2_3864_6 HRGMv2_3864_6_62 78670 79710 + 9.B.104.1.5
Gene ID: HRGMv2_3864_6_52
Type: TC
Location: 65620 - 66390 (+)
Gene ID: HRGMv2_3864_6_53
Type: pfam
Location: 66441 - 67328 (+)
Gene ID: HRGMv2_3864_6_54
Type: pfam
Location: 67377 - 68201 (+)
Gene ID: HRGMv2_3864_6_55
Type: CAZyme
Location: 68228 - 69637 (+)
Gene ID: HRGMv2_3864_6_56
Type: STP
Location: 69709 - 71982 (+)
Gene ID: HRGMv2_3864_6_57
Type: TC
Location: 72092 - 75115 (-)
Gene ID: HRGMv2_3864_6_58
Type:
Location: 75279 - 75470 (-)
Gene ID: HRGMv2_3864_6_59
Type: TC
Location: 76128 - 77492 (+)
Gene ID: HRGMv2_3864_6_60
Type: pfam
Location: 77513 - 78160 (+)
Gene ID: HRGMv2_3864_6_61
Type: pfam
Location: 78182 - 78457 (+)
Gene ID: HRGMv2_3864_6_62
Type: TC
Location: 78670 - 79710 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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