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Cluster: HRGMv2_3864_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3864_5 HRGMv2_3864_5_37 38047 40023 + GH133
CAZyme HRGMv2_3864_5 HRGMv2_3864_5_38 40063 41337 + GT4
CAZyme HRGMv2_3864_5 HRGMv2_3864_5_39 41435 42910 + GH57
CAZyme HRGMv2_3864_5 HRGMv2_3864_5_40 43516 47466 + GH36
NULL(UNKNOWN) HRGMv2_3864_5 HRGMv2_3864_5_41 47781 48395 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3864_5 HRGMv2_3864_5_42 48651 50561 + 1.A.33.1.2
pfam HRGMv2_3864_5 HRGMv2_3864_5_43 50673 52061 + AbiH
TC HRGMv2_3864_5 HRGMv2_3864_5_44 52223 54604 + 1.B.14.6.5
Gene ID: HRGMv2_3864_5_37
Type: CAZyme
Location: 38047 - 40023 (+)
Gene ID: HRGMv2_3864_5_38
Type: CAZyme
Location: 40063 - 41337 (+)
Gene ID: HRGMv2_3864_5_39
Type: CAZyme
Location: 41435 - 42910 (+)
Gene ID: HRGMv2_3864_5_40
Type: CAZyme
Location: 43516 - 47466 (+)
Gene ID: HRGMv2_3864_5_41
Type:
Location: 47781 - 48395 (+)
Gene ID: HRGMv2_3864_5_42
Type: TC
Location: 48651 - 50561 (+)
Gene ID: HRGMv2_3864_5_43
Type: pfam
Location: 50673 - 52061 (+)
Gene ID: HRGMv2_3864_5_44
Type: TC
Location: 52223 - 54604 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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