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Cluster: HRGMv2_3864_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3864_3 HRGMv2_3864_3_110 152927 154198 + 9.B.146.1.6
pfam HRGMv2_3864_3 HRGMv2_3864_3_111 154216 155604 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC HRGMv2_3864_3 HRGMv2_3864_3_112 155635 156834 + 2.A.103.1.1
pfam HRGMv2_3864_3 HRGMv2_3864_3_113 156848 157537 + Pro_isomerase
CAZyme HRGMv2_3864_3 HRGMv2_3864_3_114 157880 161935 + CBM32 | GH2
pfam HRGMv2_3864_3 HRGMv2_3864_3_115 162106 163119 - QueG_DUF1730 | Fer4_16
CAZyme HRGMv2_3864_3 HRGMv2_3864_3_116 163345 163956 - CE4
Gene ID: HRGMv2_3864_3_110
Type: TC
Location: 152927 - 154198 (+)
Gene ID: HRGMv2_3864_3_111
Type: pfam
Location: 154216 - 155604 (+)
Gene ID: HRGMv2_3864_3_112
Type: TC
Location: 155635 - 156834 (+)
Gene ID: HRGMv2_3864_3_113
Type: pfam
Location: 156848 - 157537 (+)
Gene ID: HRGMv2_3864_3_114
Type: CAZyme
Location: 157880 - 161935 (+)
Gene ID: HRGMv2_3864_3_115
Type: pfam
Location: 162106 - 163119 (-)
Gene ID: HRGMv2_3864_3_116
Type: CAZyme
Location: 163345 - 163956 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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