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Cluster: HRGMv2_3863_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3863_44 HRGMv2_3863_44_3 2097 3650 - 2.A.21.5.7
CAZyme HRGMv2_3863_44 HRGMv2_3863_44_4 3718 5799 + CBM91 | GH43_10
pfam HRGMv2_3863_44 HRGMv2_3863_44_5 5839 7008 + Acetyltransf_1 | Adenine_glyco | Acetyltransf_7 | Acetyltransf_10
pfam HRGMv2_3863_44 HRGMv2_3863_44_6 7037 10051 + PPDK_N
CAZyme HRGMv2_3863_44 HRGMv2_3863_44_7 10293 12668 - PL1
NULL(UNKNOWN) HRGMv2_3863_44 HRGMv2_3863_44_8 12679 13014 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3863_44 HRGMv2_3863_44_9 14810 14929 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3863_44 HRGMv2_3863_44_10 15179 16294 - CE2
Gene ID: HRGMv2_3863_44_3
Type: TC
Location: 2097 - 3650 (-)
Gene ID: HRGMv2_3863_44_4
Type: CAZyme
Location: 3718 - 5799 (+)
Gene ID: HRGMv2_3863_44_5
Type: pfam
Location: 5839 - 7008 (+)
Gene ID: HRGMv2_3863_44_6
Type: pfam
Location: 7037 - 10051 (+)
Gene ID: HRGMv2_3863_44_7
Type: CAZyme
Location: 10293 - 12668 (-)
Gene ID: HRGMv2_3863_44_8
Type:
Location: 12679 - 13014 (-)
Gene ID: HRGMv2_3863_44_9
Type:
Location: 14810 - 14929 (-)
Gene ID: HRGMv2_3863_44_10
Type: CAZyme
Location: 15179 - 16294 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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