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Cluster: HRGMv2_3863_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3863_3 HRGMv2_3863_3_28 57383 58705 - GH28
CAZyme HRGMv2_3863_3 HRGMv2_3863_3_29 59001 60110 + GH105
CAZyme HRGMv2_3863_3 HRGMv2_3863_3_30 60178 62709 + GH106
pfam HRGMv2_3863_3 HRGMv2_3863_3_31 63184 64179 + SdiA-regulated | Phytase-like
TC HRGMv2_3863_3 HRGMv2_3863_3_32 64144 65997 - 3.A.25.2.1
pfam HRGMv2_3863_3 HRGMv2_3863_3_33 66351 66980 - SLFN_AlbA_2
pfam HRGMv2_3863_3 HRGMv2_3863_3_34 67107 68318 + Iso_dh
TC HRGMv2_3863_3 HRGMv2_3863_3_35 68318 68971 + 9.B.20.1.4
Gene ID: HRGMv2_3863_3_28
Type: CAZyme
Location: 57383 - 58705 (-)
Gene ID: HRGMv2_3863_3_29
Type: CAZyme
Location: 59001 - 60110 (+)
Gene ID: HRGMv2_3863_3_30
Type: CAZyme
Location: 60178 - 62709 (+)
Gene ID: HRGMv2_3863_3_31
Type: pfam
Location: 63184 - 64179 (+)
Gene ID: HRGMv2_3863_3_32
Type: TC
Location: 64144 - 65997 (-)
Gene ID: HRGMv2_3863_3_33
Type: pfam
Location: 66351 - 66980 (-)
Gene ID: HRGMv2_3863_3_34
Type: pfam
Location: 67107 - 68318 (+)
Gene ID: HRGMv2_3863_3_35
Type: TC
Location: 68318 - 68971 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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