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Cluster: HRGMv2_3862_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3862_20 HRGMv2_3862_20_15 13688 15340 - 9.B.18.1.3
CAZyme HRGMv2_3862_20 HRGMv2_3862_20_16 15342 16547 - GT4
pfam HRGMv2_3862_20 HRGMv2_3862_20_17 16552 17694 - Epimerase_2
pfam HRGMv2_3862_20 HRGMv2_3862_20_18 17706 18854 - Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C
TC HRGMv2_3862_20 HRGMv2_3862_20_19 18941 19996 - 9.B.18.2.1
CAZyme HRGMv2_3862_20 HRGMv2_3862_20_20 19966 21093 - GT4
NULL(UNKNOWN) HRGMv2_3862_20 HRGMv2_3862_20_21 21102 22241 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3862_20 HRGMv2_3862_20_22 22247 23014 - CE4
Gene ID: HRGMv2_3862_20_15
Type: TC
Location: 13688 - 15340 (-)
Gene ID: HRGMv2_3862_20_16
Type: CAZyme
Location: 15342 - 16547 (-)
Gene ID: HRGMv2_3862_20_17
Type: pfam
Location: 16552 - 17694 (-)
Gene ID: HRGMv2_3862_20_18
Type: pfam
Location: 17706 - 18854 (-)
Gene ID: HRGMv2_3862_20_19
Type: TC
Location: 18941 - 19996 (-)
Gene ID: HRGMv2_3862_20_20
Type: CAZyme
Location: 19966 - 21093 (-)
Gene ID: HRGMv2_3862_20_21
Type:
Location: 21102 - 22241 (-)
Gene ID: HRGMv2_3862_20_22
Type: CAZyme
Location: 22247 - 23014 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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