PROTEIN: HRGMv2_3862_20_21
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3862_20_21.pdb
Genome ID:
Protein ID:
HRGMv2_3862_20_21
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKIYYFGPYN VVGSKYKRRS ATSAIAKINY ILYALNQAGY YVDLISSSYI LENRWCFAKG 60 GKTQINKMIT INLSPGFGYK TVVGKIFSLI FTISCILIKL LKIKATDTLI VYHGNWYSKY 120 VLLAKRIKKF QLIVEVEEIY TYAFKKNIKE LRKELYFINS ADKLLLVNDL LQNYLKFPKE 180 KTLISYGPYQ VSANENVSFK DDKIHLVYAG SFSLRKSGAQ SAIAAANYLP EQYVMHILGF 240 GDNETTNSLL KQITIINKTS KCKVVYEGEK RGIEYEKFMK SCHIGLCTQK LSCDYTLYAF 300 PSKVLAYFGF GLNVVTAPLV ALSASSINDF LTYYKEDSPQ AIAEAIINAK RFSKETLWGV 360 IKTLNDTFVA GLKQIIETK 379
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K0-F1-model_v4 | 1 | 378 | 1 | 369 | 0.7726 |
0.805 |
| AF-X8F781-F1-model_v4 | 1 | 379 | 2 | 382 | 0.7683 |
0.7971 |
| AF-K0EXF1-F1-model_v4 | 1 | 377 | 2 | 375 | 0.7648 |
0.7937 |
| AF-P9WMZ3-F1-model_v4 | 1 | 379 | 2 | 382 | 0.7616 |
0.7912 |
| AF-G3XD85-F1-model_v4 | 1 | 379 | 2 | 369 | 0.7584 |
0.7963 |
| AF-Q5F734-F1-model_v4 | 1 | 376 | 4 | 354 | 0.7573 |
0.8112 |
| AF-Q2G255-F1-model_v4 | 1 | 379 | 1 | 372 | 0.7565 |
0.793 |
| AF-Q7AQE2-F1-model_v4 | 1 | 379 | 1 | 382 | 0.7538 |
0.7824 |
| AF-Q5FAD9-F1-model_v4 | 1 | 379 | 1 | 354 | 0.7524 |
0.8009 |
| AF-Q8ZNR1-F1-model_v4 | 1 | 378 | 1 | 407 | 0.75 |
0.8008 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3P7NSP7-F1-model_v4 | GT4 | 1 | 378 | 4 | 382 | 0.9496 |
0.9648 |
| D1PQ78 | GT0 | 3 | 379 | 1 | 380 | 0.9388 |
0.9573 |
| A0A501QBR6 | GT0 | 1 | 378 | 3 | 378 | 0.9242 |
0.9422 |
| A0A5P3ATP4 | GT4 | 1 | 377 | 4 | 378 | 0.9072 |
0.9298 |
| A0A4U3F6N0 | GT4 | 1 | 379 | 4 | 401 | 0.8263 |
0.8807 |
| A0A7T0HSD8 | GT4 | 1 | 379 | 2 | 395 | 0.8245 |
0.8606 |
| AF-A0A7T0HSD8-F1-model_v4 | GT4 | 1 | 379 | 2 | 395 | 0.8245 |
0.8606 |
| A0A016GJ25 | GT4 | 1 | 379 | 4 | 400 | 0.8243 |
0.8636 |
| QXW17939.1 | GT0 | 1 | 379 | 1 | 400 | 0.8208 |
0.861 |
| ULQ54440.1 | GT4 | 1 | 378 | 5 | 392 | 0.8194 |
0.8538 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3P7NSP7 | GT4 | 1 | 378 | 4 | 382 | 0.9496 |
0.9648 |
| A0A5P3ATP4 | GT4 | 1 | 377 | 4 | 378 | 0.9072 |
0.9298 |
| A0A4U3F6N0 | GT4 | 1 | 379 | 4 | 401 | 0.8263 |
0.8807 |
| A0A7T0HSD8 | GT4 | 1 | 379 | 2 | 395 | 0.8245 |
0.8606 |
| A0A016GJ25 | GT4 | 1 | 379 | 4 | 400 | 0.8243 |
0.8636 |
| ULQ54440.1 | GT4 | 1 | 378 | 5 | 392 | 0.8194 |
0.8538 |
| B0N0E8 | GT4 | 1 | 379 | 4 | 407 | 0.8176 |
0.8633 |
| QQQ28048.1 | GT4 | 1 | 379 | 1 | 403 | 0.817 |
0.8615 |
| A0A098BXD7 | GT4 | 1 | 379 | 1 | 395 | 0.8164 |
0.8558 |
| A0A2Z4JR84 | GT4 | 1 | 379 | 3 | 389 | 0.8153 |
0.8476 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly1.cif.gz_B | 1 | 379 | 2 | 367 | 0.7707 |
0.8075 |
| 3mbo-assembly4.cif.gz_G | 1 | 379 | 1 | 363 | 0.7664 |
0.8056 |
| 3mbo-assembly3.cif.gz_F | 1 | 379 | 1 | 367 | 0.7648 |
0.8005 |
| 2jjm-assembly1.cif.gz_B | 1 | 379 | 1 | 359 | 0.7611 |
0.8034 |
| 6tvp-assembly1.cif.gz_B | 1 | 379 | 3 | 389 | 0.7593 |
0.7898 |
| 5d00-assembly1.cif.gz_B | 1 | 379 | 2 | 360 | 0.7572 |
0.802 |
| 5d01-assembly1.cif.gz_B | 1 | 379 | 2 | 359 | 0.7568 |
0.8026 |
| 6tvp-assembly1.cif.gz_A | 1 | 379 | 3 | 386 | 0.7538 |
0.7813 |
| 3mbo-assembly4.cif.gz_H | 1 | 379 | 1 | 367 | 0.7527 |
0.7903 |
| 3mbo-assembly1.cif.gz_A | 1 | 379 | 2 | 370 | 0.7525 |
0.7891 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4JAK2-F1-model_v4 | 1 | 379 | 2 | 351 | 0.764 |
0.8177 |
| AF-B2SUK8-F1-model_v4 | 1 | 379 | 1 | 371 | 0.757 |
0.7978 |
| AF-A0R043-F1-model_v4 | 3 | 379 | 1 | 376 | 0.7566 |
0.7885 |
| AF-Q9AEU1-F1-model_v4 | 1 | 379 | 1 | 333 | 0.7539 |
0.8216 |
| AF-Q9R9N0-F1-model_v4 | 1 | 379 | 1 | 341 | 0.7524 |
0.8125 |
| AF-P42982-F1-model_v4 | 1 | 379 | 3 | 373 | 0.7512 |
0.7881 |
| AF-B5A7L9-F1-model_v4 | 1 | 379 | 1 | 328 | 0.7493 |
0.8246 |
| AF-A0A0H2UR93-F1-model_v4 | 1 | 379 | 1 | 334 | 0.7488 |
0.817 |
| AF-Q93P60-F1-model_v4 | 1 | 379 | 1 | 387 | 0.7483 |
0.7853 |
| AF-Q56774-F1-model_v4 | 1 | 379 | 1 | 371 | 0.748 |
0.7892 |