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Cluster: HRGMv2_3862_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3862_5 HRGMv2_3862_5_8 7078 8430 + 2.A.66.1.32
STP HRGMv2_3862_5 HRGMv2_3862_5_9 8561 9337 - Fer4 | Fer4
NULL(UNKNOWN) HRGMv2_3862_5 HRGMv2_3862_5_10 9949 10146 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3862_5 HRGMv2_3862_5_11 10361 11230 - 2.A.7.5.3
sulfatase HRGMv2_3862_5 HRGMv2_3862_5_12 11245 12024 - S1_2
pfam HRGMv2_3862_5 HRGMv2_3862_5_13 12027 12977 - ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC HRGMv2_3862_5 HRGMv2_3862_5_14 13239 13916 - 2.A.115.2.10
pfam HRGMv2_3862_5 HRGMv2_3862_5_15 14036 15070 - DoxD | DoxA | DoxX
TC HRGMv2_3862_5 HRGMv2_3862_5_16 15478 17202 + 3.A.1.135.5
TC HRGMv2_3862_5 HRGMv2_3862_5_17 17205 18971 + 3.A.1.135.5
TC HRGMv2_3862_5 HRGMv2_3862_5_18 19118 22216 + 2.A.21.9.2
TC HRGMv2_3862_5 HRGMv2_3862_5_19 22432 23583 - 2.A.1.7.16
NULL(UNKNOWN) HRGMv2_3862_5 HRGMv2_3862_5_20 23639 25405 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3862_5 HRGMv2_3862_5_21 25421 26335 - ROK
TC HRGMv2_3862_5 HRGMv2_3862_5_22 26688 29759 + 1.B.14.6.1
TC HRGMv2_3862_5 HRGMv2_3862_5_23 29771 31420 + 8.A.46.1.3
pfam HRGMv2_3862_5 HRGMv2_3862_5_24 31468 32604 + SusE
CAZyme HRGMv2_3862_5 HRGMv2_3862_5_25 32673 33896 + GH76
CAZyme HRGMv2_3862_5 HRGMv2_3862_5_26 33904 35091 + GH76
CAZyme HRGMv2_3862_5 HRGMv2_3862_5_27 35172 37523 + GH92
TF HRGMv2_3862_5 HRGMv2_3862_5_28 37675 38412 + GntR
NULL(UNKNOWN) HRGMv2_3862_5 HRGMv2_3862_5_29 38885 39919 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3862_5 HRGMv2_3862_5_30 40011 41204 - 1.I.1.1.3
pfam HRGMv2_3862_5 HRGMv2_3862_5_31 41237 42319 - IMPDH | NMO
TC HRGMv2_3862_5 HRGMv2_3862_5_32 42779 44677 + 1.B.14.1.13
pfam HRGMv2_3862_5 HRGMv2_3862_5_33 44731 46191 + IU_nuc_hydro | FmdE
peptidase HRGMv2_3862_5 HRGMv2_3862_5_34 46321 47397 + C59.001
TC HRGMv2_3862_5 HRGMv2_3862_5_35 47499 47876 - 1.A.43.1.6
TC HRGMv2_3862_5 HRGMv2_3862_5_36 47931 49310 - 2.A.1.1.95
TC HRGMv2_3862_5 HRGMv2_3862_5_37 49478 50455 - 1.A.28.1.4
Gene ID: HRGMv2_3862_5_8
Type: TC
Location: 7078 - 8430 (+)
Gene ID: HRGMv2_3862_5_9
Type: STP
Location: 8561 - 9337 (-)
Gene ID: HRGMv2_3862_5_10
Type:
Location: 9949 - 10146 (+)
Gene ID: HRGMv2_3862_5_11
Type: TC
Location: 10361 - 11230 (-)
Gene ID: HRGMv2_3862_5_12
Type: sulfatase
Location: 11245 - 12024 (-)
Gene ID: HRGMv2_3862_5_13
Type: pfam
Location: 12027 - 12977 (-)
Gene ID: HRGMv2_3862_5_14
Type: TC
Location: 13239 - 13916 (-)
Gene ID: HRGMv2_3862_5_15
Type: pfam
Location: 14036 - 15070 (-)
Gene ID: HRGMv2_3862_5_16
Type: TC
Location: 15478 - 17202 (+)
Gene ID: HRGMv2_3862_5_17
Type: TC
Location: 17205 - 18971 (+)
Gene ID: HRGMv2_3862_5_18
Type: TC
Location: 19118 - 22216 (+)
Gene ID: HRGMv2_3862_5_19
Type: TC
Location: 22432 - 23583 (-)
Gene ID: HRGMv2_3862_5_20
Type:
Location: 23639 - 25405 (-)
Gene ID: HRGMv2_3862_5_21
Type: pfam
Location: 25421 - 26335 (-)
Gene ID: HRGMv2_3862_5_22
Type: TC
Location: 26688 - 29759 (+)
Gene ID: HRGMv2_3862_5_23
Type: TC
Location: 29771 - 31420 (+)
Gene ID: HRGMv2_3862_5_24
Type: pfam
Location: 31468 - 32604 (+)
Gene ID: HRGMv2_3862_5_25
Type: CAZyme
Location: 32673 - 33896 (+)
Gene ID: HRGMv2_3862_5_26
Type: CAZyme
Location: 33904 - 35091 (+)
Gene ID: HRGMv2_3862_5_27
Type: CAZyme
Location: 35172 - 37523 (+)
Gene ID: HRGMv2_3862_5_28
Type: TF
Location: 37675 - 38412 (+)
Gene ID: HRGMv2_3862_5_29
Type:
Location: 38885 - 39919 (+)
Gene ID: HRGMv2_3862_5_30
Type: TC
Location: 40011 - 41204 (-)
Gene ID: HRGMv2_3862_5_31
Type: pfam
Location: 41237 - 42319 (-)
Gene ID: HRGMv2_3862_5_32
Type: TC
Location: 42779 - 44677 (+)
Gene ID: HRGMv2_3862_5_33
Type: pfam
Location: 44731 - 46191 (+)
Gene ID: HRGMv2_3862_5_34
Type: peptidase
Location: 46321 - 47397 (+)
Gene ID: HRGMv2_3862_5_35
Type: TC
Location: 47499 - 47876 (-)
Gene ID: HRGMv2_3862_5_36
Type: TC
Location: 47931 - 49310 (-)
Gene ID: HRGMv2_3862_5_37
Type: TC
Location: 49478 - 50455 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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