PROTEIN: HRGMv2_3862_5_20
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3862_5_20.pdb
Genome ID:
Protein ID:
HRGMv2_3862_5_20
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MENFRKTSQS VLPVEKPKVK PEQYDIYPAF PLESGKISVG FDSLAEAIVS EKNVIIDGYI 60 GVFFEDFKEQ LNRCLQARNV QAVWWDIRAA LKTETEINAL AAPFLGEDDP IFGKRATFSL 120 SDYFNPEQLQ KIKPDPEARL NILVGCGAAL AGWAGKLIYV DLPKNEIQFR ARAGAICNLG 180 LSAPAAPKKM YKRFYFVDWI LLNRHKKHIL PAIDLLVDGQ RPDVITWIKS TDLKRGLATL 240 ASNGFRVRPW FEPGAWGGQW IRQHIEGLPK NVSNYAWSFE LIVPENGLLF ESDGRLLEVS 300 FDTLMYEAGK SVVGESCYQS YGDEFPIRMD YLDNFDGGNL SIQCHPRPEY ARQHFGEILT 360 QEETYYVLDC KDEAVVYLGF QEDIEPGKFE TALTESFKNN TPLEVDRYIQ SHPAHKHGLY 420 LIPPGTLHSS GRNNLVLEIS TTPYIFTFKM YDWLTLDLDG TPRPLNIRRA MDNLYFDRKG 480 EKVKKELIAH PCLLEKGADW ELWHLPTHPA HSYDVHRYNF HTSVDVKTEG KCHVLNLVEG 540 EKIRVETAGG LSQTISYAET YVISAAAGSY RLINESGREV KVVKAFMK 588
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DQJ1-F1-model_v4 | 239 | 587 | 1 | 314 | 0.6975 |
0.9162 |
| AF-Q2G223-F1-model_v4 | 243 | 588 | 1 | 312 | 0.6948 |
0.9147 |
| AF-A0A132Z9P5-F1-model_v4 | 239 | 588 | 1 | 316 | 0.6946 |
0.9103 |
| AF-Q2FWB3-F1-model_v4 | 255 | 587 | 1 | 285 | 0.6726 |
0.9132 |
| AF-A0A0D2GQV2-F1-model_v4 | 235 | 588 | 1 | 407 | 0.6078 |
0.8267 |
| AF-A0A1C1CQS9-F1-model_v4 | 235 | 588 | 1 | 407 | 0.607 |
0.8257 |
| AF-Q9FZH5-F1-model_v4 | 131 | 588 | 1 | 436 | 0.6048 |
0.7061 |
| AF-A0A175W8R8-F1-model_v4 | 235 | 587 | 1 | 407 | 0.6044 |
0.8243 |
| AF-P25081-F1-model_v4 | 243 | 588 | 1 | 390 | 0.604 |
0.8213 |
| AF-A0A0H3GS87-F1-model_v4 | 243 | 588 | 1 | 390 | 0.6039 |
0.8223 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-G2SXW7-F1-model_v4 | GH1 | 35 | 588 | 224 | 768 | 0.4623 |
0.5674 |
| AF-D4KJA3-F1-model_v4 | GH1 | 35 | 588 | 224 | 768 | 0.4574 |
0.5612 |
| AF-D4KYD8-F1-model_v4 | GH1 | 37 | 588 | 225 | 768 | 0.453 |
0.5562 |
| AF-A0A1D9P395-F1-model_v4 | GH1 | 36 | 588 | 223 | 765 | 0.4516 |
0.5552 |
| AF-A0A7U6KFF6-F1-model_v4 | GH1 | 36 | 588 | 226 | 764 | 0.4418 |
0.546 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1qwr-assembly2.cif.gz_B | 242 | 587 | 1 | 314 | 0.6947 |
0.9126 |
| 1zx5-assembly1.cif.gz_A | 235 | 588 | 1 | 299 | 0.6784 |
0.9083 |
| 5zvr-assembly1.cif.gz_A | 239 | 588 | 1 | 386 | 0.6089 |
0.8144 |
| 5zv0-assembly1.cif.gz_A | 239 | 588 | 1 | 386 | 0.6072 |
0.8122 |
| 5zt4-assembly1.cif.gz_A | 239 | 588 | 1 | 390 | 0.607 |
0.8165 |
| 5zuw-assembly1.cif.gz_A | 239 | 588 | 1 | 390 | 0.6065 |
0.8157 |
| 5zt5-assembly1.cif.gz_A | 239 | 588 | 1 | 391 | 0.6052 |
0.8152 |
| 5zvu-assembly1.cif.gz_A | 242 | 588 | 1 | 380 | 0.6047 |
0.8084 |
| 5zvx-assembly1.cif.gz_A | 239 | 588 | 1 | 391 | 0.6045 |
0.8142 |
| 5zuy-assembly1.cif.gz_A | 239 | 588 | 1 | 391 | 0.5987 |
0.8064 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05511-F1-model_v4 | 239 | 587 | 1 | 315 | 0.6959 |
0.9133 |
| AF-P39841-F1-model_v4 | 238 | 587 | 1 | 316 | 0.6947 |
0.9106 |
| AF-Q59935-F1-model_v4 | 239 | 588 | 1 | 314 | 0.6932 |
0.914 |
| AF-O31646-F1-model_v4 | 238 | 587 | 1 | 315 | 0.6887 |
0.9038 |
| AF-Q9FZH5-F1-model_v4 | 131 | 588 | 1 | 436 | 0.6048 |
0.7061 |
| AF-P25081-F1-model_v4 | 243 | 588 | 1 | 390 | 0.604 |
0.8213 |
| AF-Q83KZ1-F1-model_v4 | 243 | 588 | 1 | 390 | 0.6036 |
0.8207 |
| AF-P00946-F1-model_v4 | 243 | 588 | 1 | 390 | 0.6034 |
0.8204 |
| AF-Q8HXX2-F1-model_v4 | 235 | 588 | 1 | 422 | 0.5946 |
0.8254 |
| AF-Q9M884-F1-model_v4 | 119 | 588 | 1 | 428 | 0.5942 |
0.6988 |