Cluster: HRGMv2_3860_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3860
- CGC Family ID: CGCFAM_00002
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3860_9 | HRGMv2_3860_9_25 | 25392 | 26000 | - | 9.B.18.1.2 |
| CAZyme | HRGMv2_3860_9 | HRGMv2_3860_9_26 | 26364 | 27551 | - | GT4 |
| CAZyme | HRGMv2_3860_9 | HRGMv2_3860_9_27 | 27558 | 28643 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3860_9 | HRGMv2_3860_9_28 | 28667 | 29227 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3860_9 | HRGMv2_3860_9_29 | 29224 | 30135 | - | GT2 |
| pfam | HRGMv2_3860_9 | HRGMv2_3860_9_30 | 30156 | 31247 | - | EpsG |
| CAZyme | HRGMv2_3860_9 | HRGMv2_3860_9_31 | 31261 | 32001 | - | GT32 |
Gene ID: HRGMv2_3860_9_25
Type: TC
Location: 25392 - 26000 (-)
Type: TC
Location: 25392 - 26000 (-)
Gene ID: HRGMv2_3860_9_26
Type: CAZyme
Location: 26364 - 27551 (-)
Type: CAZyme
Location: 26364 - 27551 (-)
Gene ID: HRGMv2_3860_9_27
Type: CAZyme
Location: 27558 - 28643 (-)
Type: CAZyme
Location: 27558 - 28643 (-)
Gene ID: HRGMv2_3860_9_28
Type:
Location: 28667 - 29227 (-)
Type:
Location: 28667 - 29227 (-)
Gene ID: HRGMv2_3860_9_29
Type: CAZyme
Location: 29224 - 30135 (-)
Type: CAZyme
Location: 29224 - 30135 (-)
Gene ID: HRGMv2_3860_9_30
Type: pfam
Location: 30156 - 31247 (-)
Type: pfam
Location: 30156 - 31247 (-)
Gene ID: HRGMv2_3860_9_31
Type: CAZyme
Location: 31261 - 32001 (-)
Type: CAZyme
Location: 31261 - 32001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.