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PROTEIN: HRGMv2_3860_9_28

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3860_9_28.pdb
Genome ID:
HRGMv2_3860
Protein ID:
HRGMv2_3860_9_28

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSETNRILTD   DLYRYEGNGC   KSLKTKLKYF   FFVPGFQFIY   FLRKASGARN   VVSKFFWAAL 60
HRLCMFHTQI   QIPIGTKIGR   GFRISHFGSI   IINGGAVIGK   NFNISSGCLI   GYSEGKHKGI 120
PTIGDNVIMN   VNSVIVGVKI   GDNVLIAPST   FVNFNVPDNC   IVIGSPGKII   PRQSSPTAKF 180
IVYPIE 186
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q32IC4-F1-model_v4 1 166 2 170 0.7651 0.8716
AF-A0A132Z2H2-F1-model_v4 5 175 1 172 0.7578 0.8274
AF-A0A077ZMK0-F1-model_v4 5 174 1 172 0.7447 0.8163
AF-Q2G2M7-F1-model_v4 1 175 1 175 0.713 0.8283
AF-Q0PAC7-F1-model_v4 1 174 1 175 0.7037 0.8168
AF-Q8DQS9-F1-model_v4 1 175 1 172 0.7035 0.8136
AF-P95231-F1-model_v4 4 181 1 180 0.7035 0.8266
AF-X8FD92-F1-model_v4 4 180 1 178 0.7017 0.8274
AF-Q7AQF4-F1-model_v4 4 180 1 178 0.7013 0.826
AF-Q9US33-F1-model_v4 1 184 82 266 0.6844 0.8339
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6M5IZ97-F1-model_v4 GT2 1 186 274 483 0.6063 0.8887
BCS39092.1 GT4 2 166 191 363 0.5817 0.8784
BDV43052.1 GT4 4 186 1 568 0.5668 0.8794
AF-A0A250IFU7-F1-model_v4 GT2 1 178 355 531 0.55 0.8642
AF-A0A250IU01-F1-model_v4 GT2 1 176 355 532 0.5488 0.8677
AF-K9T6P7-F1-model_v4 GT2 2 179 332 505 0.5471 0.8623
A0A1C5YN28 GT2 1 172 336 516 0.5303 0.8476
AF-A0A0K1Q0U6-F1-model_v4 GT2 1 166 352 538 0.5272 0.8944
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A447LR74 GT2 1 167 28 229 0.6567 0.827
A0A6M5IZ97 GT2 1 186 274 483 0.6063 0.8887
BCS39092.1 GT4 2 166 191 363 0.5817 0.8784
BDV43052.1 GT4 4 186 1 568 0.5668 0.8794
A0A250IU01 GT2 1 176 355 532 0.5488 0.8677
K9T6P7 GT2 2 179 332 505 0.5471 0.8623
A0A1C5YN28 GT2 1 172 336 516 0.5303 0.8476
A0A0K1Q0U6 GT2 1 166 352 538 0.5272 0.8944
A0A7D3XW08 PL12 29 182 1 150 0.4481 0.8639
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4hzc-assembly2.cif.gz_G 1 178 69 242 0.687 0.8438
4hzc-assembly2.cif.gz_I 1 178 69 244 0.6868 0.8376
4hzc-assembly1.cif.gz_E 1 178 69 243 0.6862 0.8389
4hzc-assembly2.cif.gz_J 1 178 69 244 0.6851 0.8356
1ssq-assembly1.cif.gz_D 1 181 2 253 0.6834 0.8287
6jvu-assembly1.cif.gz_C 1 183 37 251 0.6822 0.8138
4h7o-assembly1.cif.gz_A 1 181 68 253 0.6814 0.8281
3mc4-assembly2.cif.gz_B 1 175 68 238 0.6811 0.8444
8i04-assembly1.cif.gz_A 1 181 38 253 0.6795 0.8257
4hzd-assembly1.cif.gz_A 1 178 74 250 0.6789 0.832
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9ZK14-F1-model_v4 3 167 1 164 0.7394 0.8231
AF-Q5HRM4-F1-model_v4 4 180 1 180 0.7274 0.833
AF-Q6GJE0-F1-model_v4 1 175 1 175 0.7128 0.8282
AF-Q6GBV9-F1-model_v4 1 174 1 175 0.7111 0.8304
AF-P77985-F1-model_v4 1 175 1 176 0.7092 0.8261
AF-Q65PC9-F1-model_v4 3 175 1 174 0.7092 0.8344
AF-P67766-F1-model_v4 4 175 1 173 0.7085 0.8331
AF-P67765-F1-model_v4 4 175 1 173 0.7083 0.8324
AF-Q5HIE6-F1-model_v4 4 175 1 173 0.708 0.8325
AF-Q8CTU2-F1-model_v4 4 175 1 173 0.7079 0.8324
Download Full SwissProt Results