Cluster: HRGMv2_3860_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3860
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3860_2 | HRGMv2_3860_2_42 | 43336 | 44829 | - | GT25 | GT25 |
| NULL(UNKNOWN) | HRGMv2_3860_2 | HRGMv2_3860_2_43 | 44826 | 46370 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_3860_2 | HRGMv2_3860_2_44 | 46474 | 48093 | + | C26.964 |
| TC | HRGMv2_3860_2 | HRGMv2_3860_2_45 | 48097 | 50160 | + | 2.A.9.3.4 |
| pfam | HRGMv2_3860_2 | HRGMv2_3860_2_46 | 50300 | 52735 | + | Big_2 | NAGPA |
| pfam | HRGMv2_3860_2 | HRGMv2_3860_2_47 | 52809 | 53999 | - | AAA_14 |
| TC | HRGMv2_3860_2 | HRGMv2_3860_2_48 | 54210 | 56039 | + | 3.A.1.106.1 |
Gene ID: HRGMv2_3860_2_42
Type: CAZyme
Location: 43336 - 44829 (-)
Type: CAZyme
Location: 43336 - 44829 (-)
Gene ID: HRGMv2_3860_2_43
Type:
Location: 44826 - 46370 (-)
Type:
Location: 44826 - 46370 (-)
Gene ID: HRGMv2_3860_2_44
Type: peptidase
Location: 46474 - 48093 (+)
Type: peptidase
Location: 46474 - 48093 (+)
Gene ID: HRGMv2_3860_2_45
Type: TC
Location: 48097 - 50160 (+)
Type: TC
Location: 48097 - 50160 (+)
Gene ID: HRGMv2_3860_2_46
Type: pfam
Location: 50300 - 52735 (+)
Type: pfam
Location: 50300 - 52735 (+)
Gene ID: HRGMv2_3860_2_47
Type: pfam
Location: 52809 - 53999 (-)
Type: pfam
Location: 52809 - 53999 (-)
Gene ID: HRGMv2_3860_2_48
Type: TC
Location: 54210 - 56039 (+)
Type: TC
Location: 54210 - 56039 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.