PROTEIN: HRGMv2_3860_2_43
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Protein File & Metadata
Source:
HRGMv2_3860_2_43.pdb
Genome ID:
Protein ID:
HRGMv2_3860_2_43
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Protein Sequence
MHLFNTSSRT GKSFVNMWVS LTYSMISLFV SFFSRGIFLN YLGTEVLGLN TTAGNLLSFL 60 NLAELGVGTA ISFTLYKPMY ERDYDRVNEI VALQGYIYKR VAMVLIAGAV VLGCAFPWIF 120 SKMELPLWYA YASFGVMLFS SLLSYFFNYR QIVVGADQRQ YRITFSYQTM IIIKALVQMW 180 GVSHFSNPFV WWVCVEAIFS CVGTMIISLV LRHYYPFLRK PLLTGKQLIA KFPDVVTKTK 240 QLFIHRISEF VLKQTSPLII YAFVSMTMVA FYGNYMTIVT GITMLAGCAY SGLGAGIGSL 300 IATGERERIL SVFHEIYSLH FIVGSIAGWG MWTLSAPFVT MWIGEQYVFS AVPLFLIILN 360 MFIQLTRNGV ELFKNGYGLF GDVGAPVVET ILNLGCSLAL GAVWGLNGVL LGVNISLILV 420 VVCWKPYYLY RHGFKMSLWH YVALFGRHVF ALALAAGACY LFDCSAIMDN STELLPRFLK 480 GGVELILFAA VLIVTLTLIV PGPKLIAKRL LHLK 514
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CWT9-F1-model_v4 | 4 | 514 | 1 | 468 | 0.7892 |
0.8458 |
| AF-Q0PAP8-F1-model_v4 | 7 | 435 | 3 | 433 | 0.7829 |
0.8768 |
| AF-A0A0H3GGV5-F1-model_v4 | 8 | 436 | 5 | 434 | 0.7724 |
0.8659 |
| AF-Q8ZKH8-F1-model_v4 | 8 | 436 | 6 | 435 | 0.7715 |
0.8674 |
| AF-Q8DNG1-F1-model_v4 | 4 | 440 | 4 | 447 | 0.7672 |
0.8623 |
| AF-Q8DPQ6-F1-model_v4 | 8 | 437 | 9 | 446 | 0.7636 |
0.8674 |
| AF-Q8ZPP2-F1-model_v4 | 8 | 436 | 6 | 447 | 0.7602 |
0.8692 |
| AF-Q32FA7-F1-model_v4 | 8 | 436 | 6 | 447 | 0.7595 |
0.8684 |
| AF-P37340-F1-model_v4 | 8 | 436 | 6 | 447 | 0.7593 |
0.8682 |
| AF-P28303-F1-model_v4 | 1 | 437 | 7 | 454 | 0.7588 |
0.8548 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 514 | 2 | 512 | 0.6948 |
0.7288 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 4 | 513 | 38 | 545 | 0.6494 |
0.7016 |
| AF-F2NKF2-F1-model_v4 | GT4 | 3 | 512 | 1 | 593 | 0.614 |
0.7949 |
| QJC17489.1 | GT2 | 1 | 514 | 333 | 843 | 0.611 |
0.7724 |
| WBL35586.1 | GT4 | 1 | 514 | 109 | 800 | 0.5901 |
0.7273 |
| A0A9W6NQN0 | GT2 | 1 | 435 | 8 | 420 | 0.5791 |
0.8228 |
| AF-D7BDH0-F1-model_v4 | GT4 | 5 | 512 | 1 | 521 | 0.5713 |
0.7393 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 514 | 4 | 652 | 0.5636 |
0.7398 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 4 | 514 | 6 | 494 | 0.5618 |
0.7456 |
| AF-A0A6P1FQ34-F1-model_v4 | GT4 | 5 | 514 | 3 | 488 | 0.543 |
0.7261 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 514 | 2 | 512 | 0.6948 |
0.7288 |
| A0A160T2N7 | GT28 | 4 | 513 | 38 | 545 | 0.6494 |
0.7016 |
| F2NKF2 | GT4 | 3 | 512 | 1 | 593 | 0.614 |
0.7949 |
| QJC17489.1 | GT2 | 1 | 514 | 333 | 843 | 0.611 |
0.7724 |
| WBL35586.1 | GT4 | 1 | 514 | 109 | 800 | 0.5901 |
0.7273 |
| A0A9W6NQN0 | GT2 | 1 | 435 | 8 | 420 | 0.5791 |
0.8228 |
| D7BDH0 | GT4 | 5 | 512 | 1 | 521 | 0.5713 |
0.7393 |
| D1BIF1 | GT4 | 1 | 514 | 4 | 652 | 0.5636 |
0.7398 |
| A0A517Z2I8 | GT2 | 4 | 514 | 6 | 494 | 0.5618 |
0.7456 |
| A0A2S5Y2G4 | GT4 | 5 | 514 | 121 | 661 | 0.5307 |
0.7103 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fv8-assembly1.cif.gz_B | 6 | 437 | 1 | 436 | 0.7641 |
0.8492 |
| 6z70-assembly1.cif.gz_A | 6 | 437 | 2 | 444 | 0.7537 |
0.8458 |
| 6ids-assembly1.cif.gz_A | 8 | 436 | 6 | 433 | 0.7498 |
0.8446 |
| 4z3p-assembly1.cif.gz_A | 5 | 436 | 2 | 424 | 0.7478 |
0.8437 |
| 7dqk-assembly1.cif.gz_A | 4 | 436 | 4 | 461 | 0.7449 |
0.86 |
| 5xjj-assembly1.cif.gz_A | 8 | 436 | 7 | 439 | 0.743 |
0.8429 |
| 3vvs-assembly1.cif.gz_A | 4 | 437 | 4 | 442 | 0.7415 |
0.8312 |
| 6hfb-assembly3.cif.gz_C | 5 | 437 | 5 | 449 | 0.741 |
0.8381 |
| 3w4t-assembly1.cif.gz_A | 4 | 437 | 4 | 444 | 0.7407 |
0.8322 |
| 6gwh-assembly1.cif.gz_A | 4 | 437 | 4 | 437 | 0.7397 |
0.8256 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9PJB9-F1-model_v4 | 5 | 514 | 1 | 536 | 0.7908 |
0.8327 |
| AF-Q9Z7H5-F1-model_v4 | 4 | 514 | 3 | 536 | 0.7828 |
0.83 |
| AF-Q46378-F1-model_v4 | 5 | 514 | 5 | 536 | 0.7808 |
0.8231 |
| AF-Q5KZL2-F1-model_v4 | 8 | 437 | 9 | 447 | 0.7764 |
0.8828 |
| AF-Q6HLG9-F1-model_v4 | 8 | 437 | 9 | 447 | 0.7744 |
0.8791 |
| AF-Q63DZ4-F1-model_v4 | 8 | 437 | 9 | 447 | 0.7744 |
0.879 |
| AF-Q81G28-F1-model_v4 | 8 | 437 | 9 | 447 | 0.7733 |
0.8771 |
| AF-Q8CUL5-F1-model_v4 | 8 | 437 | 9 | 447 | 0.7713 |
0.8706 |
| AF-Q81T85-F1-model_v4 | 8 | 437 | 9 | 447 | 0.7713 |
0.8757 |
| AF-Q65IG9-F1-model_v4 | 8 | 437 | 9 | 447 | 0.771 |
0.8746 |