Cluster: HRGMv2_3860_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3860
- CGC Family ID: CGCFAM_05876
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3860_71 | HRGMv2_3860_71_5 | 4095 | 5900 | + | 4.C.1.1.14 |
| NULL(UNKNOWN) | HRGMv2_3860_71 | HRGMv2_3860_71_6 | 5904 | 6392 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3860_71 | HRGMv2_3860_71_7 | 6385 | 8199 | - | 2.A.16.2.2 |
| NULL(UNKNOWN) | HRGMv2_3860_71 | HRGMv2_3860_71_8 | 8318 | 9220 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3860_71 | HRGMv2_3860_71_9 | 9344 | 11563 | + | GH20 |
Gene ID: HRGMv2_3860_71_5
Type: TC
Location: 4095 - 5900 (+)
Type: TC
Location: 4095 - 5900 (+)
Gene ID: HRGMv2_3860_71_6
Type:
Location: 5904 - 6392 (-)
Type:
Location: 5904 - 6392 (-)
Gene ID: HRGMv2_3860_71_7
Type: TC
Location: 6385 - 8199 (-)
Type: TC
Location: 6385 - 8199 (-)
Gene ID: HRGMv2_3860_71_8
Type:
Location: 8318 - 9220 (+)
Type:
Location: 8318 - 9220 (+)
Gene ID: HRGMv2_3860_71_9
Type: CAZyme
Location: 9344 - 11563 (+)
Type: CAZyme
Location: 9344 - 11563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937995285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.