PROTEIN: HRGMv2_3860_71_8
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Protein File & Metadata
Source:
HRGMv2_3860_71_8.pdb
Genome ID:
Protein ID:
HRGMv2_3860_71_8
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Protein Sequence
MKPTLFVLAA GMGSRYGGLK QLDGVGPNGE TIMDYSVYDA LKAGFGKVVF VIRKDFEQDF 60 REKVLSKYQD HINVDVVFQS IDALPEGFKA PADRQKPWGT NHAVLMGADV IKEPFAVINA 120 DDYYGPDAFR VIAEELSKPH TEKGRYCMVG FRVGNTMTEN GSVSRGVCTA VDGHLDSIVE 180 RTAIAYDGEH RICFKDENGD TQYLDPNTPV SMNFWGFTPD YFDFSKREFI KFLESRINEP 240 KSEYYIPTAV NDLIHSGEAV VKLLDTTSRW FGVTYAEDRP VVVARLASLH ADGTYPERLF 300
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EXU8-F1-model_v4 | 3 | 297 | 1 | 242 | 0.7405 |
0.8416 |
| AF-Q5FAG2-F1-model_v4 | 3 | 290 | 1 | 231 | 0.7304 |
0.8436 |
| AF-Q0P8J1-F1-model_v4 | 3 | 286 | 1 | 221 | 0.7289 |
0.8574 |
| AF-Q9I5U0-F1-model_v4 | 3 | 291 | 1 | 224 | 0.7225 |
0.8451 |
| AF-O25363-F1-model_v4 | 1 | 291 | 1 | 273 | 0.7096 |
0.7618 |
| AF-A0A133CIA9-F1-model_v4 | 3 | 300 | 1 | 252 | 0.7031 |
0.8334 |
| AF-Q8CWT6-F1-model_v4 | 3 | 300 | 1 | 252 | 0.702 |
0.8334 |
| AF-Q32EG4-F1-model_v4 | 1 | 300 | 1 | 255 | 0.7015 |
0.828 |
| AF-Q5F5M3-F1-model_v4 | 3 | 300 | 1 | 252 | 0.701 |
0.8311 |
| AF-A0A0H3GQN6-F1-model_v4 | 3 | 300 | 1 | 252 | 0.7008 |
0.832 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7K1WXA4 | GT2 | 1 | 300 | 1 | 290 | 0.7558 |
0.7917 |
| A0A8D5JT12 | GT2 | 1 | 297 | 2 | 325 | 0.582 |
0.7316 |
| AF-A0A090AI64-F1-model_v4 | GT2 | 1 | 297 | 1 | 321 | 0.5737 |
0.7201 |
| AF-E1W3N1-F1-model_v4 | GT8 | 1 | 300 | 7 | 273 | 0.5688 |
0.6382 |
| AF-A0A075GTN1-F1-model_v4 | GT2 | 1 | 297 | 2 | 324 | 0.566 |
0.7128 |
| AF-A0A075GZE0-F1-model_v4 | GT2 | 1 | 297 | 2 | 324 | 0.5646 |
0.7111 |
| AF-A0A2P1QRU3-F1-model_v4 | GT2 | 1 | 298 | 3 | 413 | 0.564 |
0.7079 |
| AF-A0A0S2IVB6-F1-model_v4 | GT2 | 1 | 297 | 3 | 329 | 0.564 |
0.71 |
| AF-B0STX1-F1-model_v4 | GT2 | 1 | 297 | 3 | 330 | 0.5639 |
0.7148 |
| B0STX1 | GT2 | 1 | 297 | 3 | 330 | 0.5639 |
0.7148 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7K1WXA4 | GT2 | 1 | 300 | 1 | 290 | 0.7558 |
0.7917 |
| A0A7G8V6Q8 | GT2 | 1 | 289 | 5 | 231 | 0.588 |
0.6959 |
| A0A8D5JT12 | GT2 | 1 | 297 | 2 | 325 | 0.582 |
0.7316 |
| A0A090AI64 | GT2 | 1 | 297 | 1 | 321 | 0.5737 |
0.7201 |
| E1W3N1 | GT8 | 1 | 300 | 7 | 273 | 0.5688 |
0.6382 |
| A0A075GTN1 | GT2 | 1 | 297 | 2 | 324 | 0.566 |
0.7128 |
| B0STX1 | GT2 | 1 | 297 | 3 | 330 | 0.5639 |
0.7148 |
| B8FFU9 | GT2 | 1 | 298 | 3 | 411 | 0.5557 |
0.6996 |
| A0A7S7QP73 | GT2 | 1 | 277 | 3 | 217 | 0.5472 |
0.7444 |
| A0A5Q5AX21 | GT8 | 1 | 300 | 3 | 261 | 0.5453 |
0.6472 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3pnn-assembly1.cif.gz_A | 1 | 300 | 2 | 301 | 0.9622 |
0.9721 |
| 4jd0-assembly1.cif.gz_A | 1 | 300 | 4 | 245 | 0.7552 |
0.8596 |
| 3hl3-assembly1.cif.gz_A | 1 | 300 | 1 | 244 | 0.7508 |
0.8513 |
| 4y7t-assembly1.cif.gz_A | 3 | 291 | 1 | 218 | 0.7194 |
0.8511 |
| 4y7u-assembly1.cif.gz_A | 3 | 291 | 1 | 224 | 0.7192 |
0.8423 |
| 5xhw-assembly1.cif.gz_A | 2 | 287 | 1 | 225 | 0.7168 |
0.8391 |
| 3juk-assembly1.cif.gz_D | 1 | 291 | 1 | 264 | 0.7162 |
0.7808 |
| 2xmh-assembly2.cif.gz_C | 1 | 274 | 1 | 201 | 0.7154 |
0.8741 |
| 6jq8-assembly1.cif.gz_A | 2 | 287 | 1 | 225 | 0.7149 |
0.837 |
| 5ids-assembly1.cif.gz_B | 1 | 300 | 1 | 253 | 0.7144 |
0.8427 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39629-F1-model_v4 | 3 | 297 | 1 | 246 | 0.7608 |
0.8537 |
| AF-D4GYH1-F1-model_v4 | 3 | 294 | 1 | 242 | 0.7492 |
0.8503 |
| AF-Q9JXY0-F1-model_v4 | 3 | 290 | 1 | 231 | 0.7298 |
0.843 |
| AF-Q88QT2-F1-model_v4 | 3 | 291 | 1 | 223 | 0.7228 |
0.8475 |
| AF-Q9I5U0-F1-model_v4 | 3 | 291 | 1 | 224 | 0.7225 |
0.8451 |
| AF-Q7NGU6-F1-model_v4 | 3 | 297 | 1 | 233 | 0.718 |
0.8271 |
| AF-P55625-F1-model_v4 | 1 | 293 | 4 | 244 | 0.7174 |
0.8216 |
| AF-Q73FC1-F1-model_v4 | 2 | 292 | 1 | 226 | 0.7171 |
0.8366 |
| AF-A0R8F7-F1-model_v4 | 2 | 292 | 1 | 226 | 0.7167 |
0.8362 |
| AF-A8F958-F1-model_v4 | 1 | 292 | 1 | 229 | 0.7165 |
0.832 |