Cluster: HRGMv2_3850_CGC20
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3850
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3850_22 | HRGMv2_3850_22_35 | 27577 | 28737 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3850_22 | HRGMv2_3850_22_36 | 28753 | 29691 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_37 | 29720 | 30949 | - | 2.A.1.35.1 |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_38 | 31067 | 32452 | - | 2.A.3.3.22 |
| pfam | HRGMv2_3850_22 | HRGMv2_3850_22_39 | 32697 | 34154 | + | Aldedh |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_40 | 34170 | 35024 | + | 1.B.52.2.1 |
| pfam | HRGMv2_3850_22 | HRGMv2_3850_22_41 | 35154 | 36053 | + | adh_short | KR | adh_short_C2 | SDR |
| CAZyme | HRGMv2_3850_22 | HRGMv2_3850_22_42 | 36100 | 37167 | - | GT2 |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_43 | 37326 | 39215 | + | 3.A.1.120.6 |
| TF | HRGMv2_3850_22 | HRGMv2_3850_22_44 | 39404 | 39826 | + | MerR |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_45 | 39890 | 41074 | + | 2.A.1.32.3 |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_46 | 41118 | 42674 | - | 3.A.1.121.4 |
| TC | HRGMv2_3850_22 | HRGMv2_3850_22_47 | 42846 | 43976 | + | 3.A.18.1.1 |
Gene ID: HRGMv2_3850_22_35
Type: CAZyme
Location: 27577 - 28737 (+)
Type: CAZyme
Location: 27577 - 28737 (+)
Gene ID: HRGMv2_3850_22_36
Type:
Location: 28753 - 29691 (+)
Type:
Location: 28753 - 29691 (+)
Gene ID: HRGMv2_3850_22_37
Type: TC
Location: 29720 - 30949 (-)
Type: TC
Location: 29720 - 30949 (-)
Gene ID: HRGMv2_3850_22_38
Type: TC
Location: 31067 - 32452 (-)
Type: TC
Location: 31067 - 32452 (-)
Gene ID: HRGMv2_3850_22_39
Type: pfam
Location: 32697 - 34154 (+)
Type: pfam
Location: 32697 - 34154 (+)
Gene ID: HRGMv2_3850_22_40
Type: TC
Location: 34170 - 35024 (+)
Type: TC
Location: 34170 - 35024 (+)
Gene ID: HRGMv2_3850_22_41
Type: pfam
Location: 35154 - 36053 (+)
Type: pfam
Location: 35154 - 36053 (+)
Gene ID: HRGMv2_3850_22_42
Type: CAZyme
Location: 36100 - 37167 (-)
Type: CAZyme
Location: 36100 - 37167 (-)
Gene ID: HRGMv2_3850_22_43
Type: TC
Location: 37326 - 39215 (+)
Type: TC
Location: 37326 - 39215 (+)
Gene ID: HRGMv2_3850_22_44
Type: TF
Location: 39404 - 39826 (+)
Type: TF
Location: 39404 - 39826 (+)
Gene ID: HRGMv2_3850_22_45
Type: TC
Location: 39890 - 41074 (+)
Type: TC
Location: 39890 - 41074 (+)
Gene ID: HRGMv2_3850_22_46
Type: TC
Location: 41118 - 42674 (-)
Type: TC
Location: 41118 - 42674 (-)
Gene ID: HRGMv2_3850_22_47
Type: TC
Location: 42846 - 43976 (+)
Type: TC
Location: 42846 - 43976 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales
Family
Bacillaceae
Genus
Bacillus
Species
Bacillus velezensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.