PROTEIN: HRGMv2_3850_22_36
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Protein File & Metadata
Source:
HRGMv2_3850_22_36.pdb
Genome ID:
Protein ID:
HRGMv2_3850_22_36
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Protein Sequence
MSKYHFSTIV SRTHIFKLMP MIHSLHEHCR DFHLYVLCVD QKAYELLQQV PWEHVTAVQL 60 HEMEDPELLE AKGGRTFHEY CWTLKPAFLF HVMTEYDEAE YFAHLDTDLF FFSDAGELFA 120 EKPDASLFLT DHRNSERFAS YYKLTGQYNT GFVGARNTGE AYRAVWQWRQ DCISYCTVEM 180 NEEKKTYGDQ RYVEKWPAQF EHVHVTESIG ANAALWNIEQ YDVSLRDGAV YVNDTPLIFY 240 HFSGFTLVTE NEFNLCWYYH IDDEATVNMI YVPYIKNVKK WIDEIQKAFP DFRDGFIPKY 300 AVPDTHFYTV ET 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A4HTZ0-F1-model_v4 | 2 | 310 | 5 | 306 | 0.6831 |
0.7161 |
| AF-A0A132Z517-F1-model_v4 | 1 | 309 | 5 | 285 | 0.6826 |
0.7449 |
| AF-A0A132Z6Q5-F1-model_v4 | 1 | 292 | 3 | 286 | 0.6707 |
0.7422 |
| AF-Q4DS53-F1-model_v4 | 2 | 312 | 4 | 326 | 0.6705 |
0.7049 |
| AF-Q6IQP1-F1-model_v4 | 1 | 301 | 2 | 310 | 0.6654 |
0.721 |
| AF-Q4D552-F1-model_v4 | 2 | 312 | 12 | 334 | 0.6643 |
0.7051 |
| AF-Q383H3-F1-model_v4 | 2 | 312 | 12 | 327 | 0.6618 |
0.7035 |
| AF-Q6NV37-F1-model_v4 | 1 | 304 | 1 | 316 | 0.6606 |
0.7172 |
| AF-Q329M9-F1-model_v4 | 1 | 311 | 16 | 316 | 0.6574 |
0.723 |
| AF-A0A1C1CPQ1-F1-model_v4 | 1 | 306 | 9 | 334 | 0.6572 |
0.7269 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7S9EPA8-F1-model_v4 | GT0 | 1 | 312 | 1 | 312 | 0.9985 |
1.002 |
| AF-A0A0X8KFH1-F1-model_v4 | GT0 | 1 | 312 | 1 | 312 | 0.9984 |
1.002 |
| AF-A0A806QNC2-F1-model_v4 | GT0 | 1 | 312 | 1 | 312 | 0.9983 |
1.002 |
| AF-A7Z2B5-F1-model_v4 | GT0 | 1 | 312 | 1 | 312 | 0.9979 |
1.002 |
| AF-A0A7U5CN24-F1-model_v4 | GT0 | 1 | 312 | 1 | 312 | 0.9978 |
1.001 |
| AF-A0A2K9KEM1-F1-model_v4 | GT0 | 1 | 312 | 1 | 312 | 0.9978 |
1.001 |
| AF-I2C2C7-F1-model_v4 | GT0 | 1 | 312 | 2 | 313 | 0.9968 |
1.002 |
| AF-S6FD07-F1-model_v4 | GT0 | 1 | 312 | 2 | 313 | 0.9966 |
1.002 |
| S6FD07 | GT0 | 1 | 312 | 2 | 313 | 0.9966 |
1.002 |
| AF-O31542-F1-model_v4 | GT0 | 1 | 311 | 1 | 311 | 0.9958 |
1.001 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UTO04667.1 | GT8 | 1 | 284 | 4 | 265 | 0.6967 |
0.8031 |
| QWD87856.1 | GT8 | 1 | 306 | 2 | 275 | 0.6914 |
0.7772 |
| UNU41506.1 | GT8 | 1 | 287 | 1 | 282 | 0.6885 |
0.7471 |
| A0A9Q9DA86 | GT8 | 4 | 302 | 1 | 258 | 0.6855 |
0.7986 |
| A0A249A422 | GT8 | 1 | 284 | 1 | 262 | 0.6852 |
0.7882 |
| A0A5P9GUX5 | GT8 | 1 | 288 | 3 | 291 | 0.6825 |
0.7417 |
| A0A6I4HW01 | GT8 | 1 | 303 | 4 | 282 | 0.6808 |
0.7594 |
| UWG98792.1 | GT8 | 4 | 287 | 1 | 273 | 0.6807 |
0.7491 |
| WJH40378.1 | GT8 | 1 | 303 | 1 | 258 | 0.6805 |
0.7911 |
| QDW74493.1 | GT8 | 1 | 289 | 9 | 285 | 0.6789 |
0.7549 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ueg-assembly1.cif.gz_B-2 | 1 | 287 | 1 | 249 | 0.7062 |
0.8079 |
| 8cvz-assembly1.cif.gz_J | 1 | 290 | 1 | 261 | 0.7045 |
0.7897 |
| 1ll0-assembly1.cif.gz_A | 1 | 292 | 1 | 264 | 0.7013 |
0.7826 |
| 1ll0-assembly2.cif.gz_C | 1 | 292 | 1 | 262 | 0.7008 |
0.7845 |
| 3v90-assembly1.cif.gz_A | 1 | 290 | 1 | 260 | 0.7002 |
0.7861 |
| 1ll0-assembly4.cif.gz_H | 1 | 289 | 1 | 260 | 0.6998 |
0.7855 |
| 1zdg-assembly1.cif.gz_A-2 | 1 | 289 | 1 | 258 | 0.6997 |
0.7886 |
| 4ueg-assembly1.cif.gz_A-2 | 1 | 290 | 1 | 242 | 0.6997 |
0.8092 |
| 6eql-assembly1.cif.gz_A | 1 | 286 | 1 | 255 | 0.6992 |
0.7911 |
| 3v8z-assembly1.cif.gz_A | 1 | 289 | 1 | 256 | 0.6992 |
0.7903 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31542-F1-model_v4 | 1 | 311 | 1 | 311 | 0.9958 |
1.001 |
| AF-O06484-F1-model_v4 | 2 | 303 | 1 | 303 | 0.8935 |
0.9226 |
| AF-P25148-F1-model_v4 | 1 | 299 | 4 | 286 | 0.6785 |
0.7403 |
| AF-Q9R062-F1-model_v4 | 1 | 302 | 1 | 283 | 0.6552 |
0.7619 |
| AF-O08730-F1-model_v4 | 1 | 301 | 1 | 312 | 0.6505 |
0.7159 |
| AF-P19817-F1-model_v4 | 1 | 311 | 23 | 317 | 0.6486 |
0.73 |
| AF-P27129-F1-model_v4 | 1 | 309 | 24 | 317 | 0.647 |
0.7325 |
| AF-P19816-F1-model_v4 | 1 | 311 | 24 | 319 | 0.6455 |
0.7256 |
| AF-P43974-F1-model_v4 | 1 | 311 | 36 | 323 | 0.6433 |
0.735 |
| AF-P27128-F1-model_v4 | 1 | 311 | 26 | 321 | 0.6423 |
0.7242 |