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Cluster: HRGMv2_3815_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_3 HRGMv2_3815_3_2 123 905 - 3.A.1.132.6
pfam HRGMv2_3815_3 HRGMv2_3815_3_3 1153 1965 - GATase_4
TC HRGMv2_3815_3 HRGMv2_3815_3_4 1989 2798 - 3.A.1.3.17
TC HRGMv2_3815_3 HRGMv2_3815_3_5 2795 3505 - 3.A.1.3.19
TC HRGMv2_3815_3 HRGMv2_3815_3_6 3509 4510 - 3.A.1.3.16
TC HRGMv2_3815_3 HRGMv2_3815_3_7 4549 5304 - 3.A.1.3.9
NULL(UNKNOWN) HRGMv2_3815_3 HRGMv2_3815_3_8 5728 5982 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3815_3 HRGMv2_3815_3_9 6041 8386 + GH31_15
TC HRGMv2_3815_3 HRGMv2_3815_3_10 8617 10176 + 2.A.22.4.3
Gene ID: HRGMv2_3815_3_2
Type: TC
Location: 123 - 905 (-)
Gene ID: HRGMv2_3815_3_3
Type: pfam
Location: 1153 - 1965 (-)
Gene ID: HRGMv2_3815_3_4
Type: TC
Location: 1989 - 2798 (-)
Gene ID: HRGMv2_3815_3_5
Type: TC
Location: 2795 - 3505 (-)
Gene ID: HRGMv2_3815_3_6
Type: TC
Location: 3509 - 4510 (-)
Gene ID: HRGMv2_3815_3_7
Type: TC
Location: 4549 - 5304 (-)
Gene ID: HRGMv2_3815_3_8
Type:
Location: 5728 - 5982 (+)
Gene ID: HRGMv2_3815_3_9
Type: CAZyme
Location: 6041 - 8386 (+)
Gene ID: HRGMv2_3815_3_10
Type: TC
Location: 8617 - 10176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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