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Cluster: HRGMv2_3815_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_9 HRGMv2_3815_9_25 24861 25934 - 3.A.1.1.23
TC HRGMv2_3815_9 HRGMv2_3815_9_26 25941 27227 - 3.A.1.1.3
TC HRGMv2_3815_9 HRGMv2_3815_9_27 27245 28114 - 3.A.1.1.3
TC HRGMv2_3815_9 HRGMv2_3815_9_28 28111 29019 - 3.A.1.1.28
TC HRGMv2_3815_9 HRGMv2_3815_9_29 29112 29558 - 2.A.117.1.8
peptidase HRGMv2_3815_9 HRGMv2_3815_9_30 29652 30185 - C56.UNW
pfam HRGMv2_3815_9 HRGMv2_3815_9_31 30234 31247 - Amidohydro_2
CAZyme HRGMv2_3815_9 HRGMv2_3815_9_32 31373 32482 - GT4
CAZyme HRGMv2_3815_9 HRGMv2_3815_9_33 32479 33558 - GT4
CAZyme HRGMv2_3815_9 HRGMv2_3815_9_34 33844 34992 + GT4
Gene ID: HRGMv2_3815_9_25
Type: TC
Location: 24861 - 25934 (-)
Gene ID: HRGMv2_3815_9_26
Type: TC
Location: 25941 - 27227 (-)
Gene ID: HRGMv2_3815_9_27
Type: TC
Location: 27245 - 28114 (-)
Gene ID: HRGMv2_3815_9_28
Type: TC
Location: 28111 - 29019 (-)
Gene ID: HRGMv2_3815_9_29
Type: TC
Location: 29112 - 29558 (-)
Gene ID: HRGMv2_3815_9_30
Type: peptidase
Location: 29652 - 30185 (-)
Gene ID: HRGMv2_3815_9_31
Type: pfam
Location: 30234 - 31247 (-)
Gene ID: HRGMv2_3815_9_32
Type: CAZyme
Location: 31373 - 32482 (-)
Gene ID: HRGMv2_3815_9_33
Type: CAZyme
Location: 32479 - 33558 (-)
Gene ID: HRGMv2_3815_9_34
Type: CAZyme
Location: 33844 - 34992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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