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Cluster: HRGMv2_3815_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_1 HRGMv2_3815_1_158 160055 160924 + 3.A.1.103.1
TC HRGMv2_3815_1 HRGMv2_3815_1_159 160926 161660 + 3.A.1.103.5
CAZyme HRGMv2_3815_1 HRGMv2_3815_1_160 161663 162589 + GT2
CAZyme HRGMv2_3815_1 HRGMv2_3815_1_161 162655 164496 - GH16_3
CAZyme HRGMv2_3815_1 HRGMv2_3815_1_162 164644 166557 + GH16_3
CAZyme HRGMv2_3815_1 HRGMv2_3815_1_163 166614 167504 - GT2
TC HRGMv2_3815_1 HRGMv2_3815_1_164 167571 169655 - 9.B.97.5.1
pfam HRGMv2_3815_1 HRGMv2_3815_1_165 169832 171229 + Lyase_1 | FumaraseC_C
TC HRGMv2_3815_1 HRGMv2_3815_1_166 171285 172181 + 8.A.5.1.7
Gene ID: HRGMv2_3815_1_158
Type: TC
Location: 160055 - 160924 (+)
Gene ID: HRGMv2_3815_1_159
Type: TC
Location: 160926 - 161660 (+)
Gene ID: HRGMv2_3815_1_160
Type: CAZyme
Location: 161663 - 162589 (+)
Gene ID: HRGMv2_3815_1_161
Type: CAZyme
Location: 162655 - 164496 (-)
Gene ID: HRGMv2_3815_1_162
Type: CAZyme
Location: 164644 - 166557 (+)
Gene ID: HRGMv2_3815_1_163
Type: CAZyme
Location: 166614 - 167504 (-)
Gene ID: HRGMv2_3815_1_164
Type: TC
Location: 167571 - 169655 (-)
Gene ID: HRGMv2_3815_1_165
Type: pfam
Location: 169832 - 171229 (+)
Gene ID: HRGMv2_3815_1_166
Type: TC
Location: 171285 - 172181 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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